RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CLCN5P51795 746 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 EMC2Q15006 297 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 XKR9Q5GH70 373 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 RARS2Q5T160 578 aaKnown RBP10.17□□□□□ -0.78
HDAC3-212ENST00000492407 NOTUMQ6P988 496 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 PIK3AP1Q6ZUJ8 805 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 RNF168Q8IYW5 571 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-212ENST00000492407 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
HDAC3-212ENST00000492407 RNF149Q8NC42 400 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 BCL7CQ8WUZ0 217 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-212ENST00000492407 TMEM143Q96AN5 459 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 MTRQ99707 1265 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 HERC2P3Q9BVR0 1158 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 APOL5Q9BWW9 433 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 CSRNP2Q9H175 543 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 RXFP1Q9HBX9 757 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-212ENST00000492407 DNAJB4Q9UDY4 337 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 INPP5FQ9Y2H2 1132 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 GIT1Q9Y2X7 761 aa10.17□□□□□ -0.78
HDAC3-212ENST00000492407 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 GALR2O43603 387 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-212ENST00000492407 BRD1O95696 1058 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 ADH1AP07327 375 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 CNPP09543 421 aaKnown RBP10.16□□□□□ -0.78
HDAC3-212ENST00000492407 EPCAMP16422 314 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 CA8P35219 290 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 KRT2P35908 639 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 ARL2P36404 184 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 CREMQ03060 361 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 DSC1Q08554 894 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 NCAPH2Q6IBW4 605 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 COLGALT2Q8IYK4 626 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 SMG8Q8ND04 991 aaKnown RBP10.16□□□□□ -0.78
HDAC3-212ENST00000492407 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 NXPE3Q969Y0 559 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 DYDC2Q96IM9 177 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 RPS6KC1Q96S38 1066 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 COLEC11Q9BWP8 271 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 VN1R3Q9BXE9 311 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 MINDY3Q9H8M7 445 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC3-212ENST00000492407 IGSF9Q9P2J2 1179 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 ORC3Q9UBD5 711 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-212ENST00000492407 TPCN1Q9ULQ1 816 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 WDFY4Q6ZS81 3184 aa10.16□□□□□ -0.78
HDAC3-212ENST00000492407 ARL5CA6NH57 179 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 TSPAN1O60635 241 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 CTDNEP1O95476 244 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 URODP06132 367 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 GLUD2P49448 558 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 VCPP55072 806 aaKnown RBP10.15□□□□□ -0.78
HDAC3-212ENST00000492407 DSG1Q02413 1049 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 TDGQ13569 410 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 CALCRLQ16602 461 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 LONRF3Q496Y0 759 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 KIAA0319Q5VV43 1072 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 ASTLQ6HA08 431 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-212ENST00000492407 TMC5Q6UXY8 1006 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 CCDC149Q6ZUS6 474 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 TPH2Q8IWU9 490 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 C12orf76Q8N812 135 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-212ENST00000492407 OXER1Q8TDS5 423 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 AUTS2Q8WXX7 1259 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 STAMQ92783 540 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 EIF2AK1Q9BQI3 630 aaKnown RBP10.15□□□□□ -0.78
HDAC3-212ENST00000492407 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
HDAC3-212ENST00000492407 GBP3Q9H0R5 595 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 PLEKHA4Q9H4M7 779 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 XPNPEP1Q9NQW7 623 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 CHST7Q9NS84 486 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 FNIP2Q9P278 1114 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 LIMD1Q9UGP4 676 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 IPPQ9Y573 584 aa10.15□□□□□ -0.78
HDAC3-212ENST00000492407 A0A1B0GUA9 196 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 INO80B-WBP1J3KQ70 363 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 B4GALT3O60512 393 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 POMCP01189 267 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 FDPSP14324 419 aaKnown RBP10.14□□□□□ -0.79
HDAC3-212ENST00000492407 MBTD1Q05BQ5 628 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 ORC2Q13416 577 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-212ENST00000492407 CTTNQ14247 550 aaKnown RBP10.14□□□□□ -0.79
HDAC3-212ENST00000492407 AMHR2Q16671 573 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 SLC27A1Q6PCB7 646 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 PPP4R3CPQ6ZMV5 832 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 MCPH1Q8NEM0 835 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 ATOH1Q92858 354 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-212ENST00000492407 GTF3C6Q969F1 213 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 MTMR9Q96QG7 549 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 TTC12Q9H892 705 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-212ENST00000492407 WDR6Q9NNW5 1121 aaKnown RBP10.14□□□□□ -0.79
HDAC3-212ENST00000492407 ZDHHC7Q9NXF8 308 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 EPS15L1Q9UBC2 864 aa10.14□□□□□ -0.79
HDAC3-212ENST00000492407 SPDYE4A6NLX3 237 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 ZBTB39O15060 712 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 TEX28O15482 410 aa10.13□□□□□ -0.79
HDAC3-212ENST00000492407 NEMFO60524 1076 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms