RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NT5C3AQ9H0P0 336 aa27.26■■□□□ 1.95
UPF3A-209ENST00000492270 LZTS1Q9Y250 596 aa27.26■■□□□ 1.95
UPF3A-209ENST00000492270 STX6O43752 255 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 DDHD2O94830 711 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 POMCP01189 267 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 MLH1P40692 756 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 NRIP1P48552 1158 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 ALDH7A1P49419 539 aaKnown RBP27.25■■□□□ 1.95
UPF3A-209ENST00000492270 DLX2Q07687 328 aaPredicted RBP27.25■■□□□ 1.95
UPF3A-209ENST00000492270 RAD51AP2Q09MP3 1159 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 PTPAQ15257 358 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 CTC1Q2NKJ3 1217 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 LEXMQ3ZCV2 418 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 PLPP4Q5VZY2 271 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 HSCBQ8IWL3 235 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.25■■□□□ 1.95
UPF3A-209ENST00000492270 BCL7CQ8WUZ0 217 aaPredicted RBP27.25■■□□□ 1.95
UPF3A-209ENST00000492270 AK8Q96MA6 479 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 ZFP42Q96MM3 310 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 PDZD7Q9H5P4 517 aa27.25■■□□□ 1.95
UPF3A-209ENST00000492270 SLC11A1P49279 550 aa27.24■■□□□ 1.95
UPF3A-209ENST00000492270 PEX3P56589 373 aa27.24■■□□□ 1.95
UPF3A-209ENST00000492270 CEBPZQ03701 1054 aaKnown RBP27.24■■□□□ 1.95
UPF3A-209ENST00000492270 PRPF4BQ13523 1007 aaKnown RBP27.24■■□□□ 1.95
UPF3A-209ENST00000492270 MAPK6Q16659 721 aa27.24■■□□□ 1.95
UPF3A-209ENST00000492270 UHRF1Q96T88 793 aaPredicted RBP27.24■■□□□ 1.95
UPF3A-209ENST00000492270 GAD1Q99259 594 aa27.24■■□□□ 1.95
UPF3A-209ENST00000492270 TCF25Q9BQ70 676 aa27.24■■□□□ 1.95
UPF3A-209ENST00000492270 ARL5CA6NH57 179 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 PER2O15055 1255 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 TBX10O75333 385 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 GALTP07902 379 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 AKAP5P24588 427 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 SLC12A3P55017 1021 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 KRT17Q04695 432 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 SYT2Q8N9I0 419 aaPredicted RBP27.23■■□□□ 1.95
UPF3A-209ENST00000492270 PPP2R3CQ969Q6 453 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 UBN1Q9NPG3 1134 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 ENTPD7Q9NQZ7 604 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 MIOSQ9NXC5 875 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 PUF60Q9UHX1 559 aaKnown RBP27.23■■□□□ 1.95
UPF3A-209ENST00000492270 MUC3AQ02505 3323 aa27.23■■□□□ 1.95
UPF3A-209ENST00000492270 NCOR1O75376 2440 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 SFI1A8K8P3 1242 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 ACKR2O00590 384 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 PLA2G4BP0C869 781 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 MARCKSP29966 332 aaPredicted RBP27.22■■□□□ 1.95
UPF3A-209ENST00000492270 LONP1P36776 959 aaKnown RBP27.22■■□□□ 1.95
UPF3A-209ENST00000492270 UBA7P41226 1012 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 NPTX2P47972 431 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 SCNN1GP51170 649 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 ADAM15Q13444 863 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 TMEM132AQ24JP5 1023 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 EEF1DP3Q658K8 133 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 TMEM169Q96HH4 297 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 DRC1Q96MC2 740 aa27.22■■□□□ 1.95
UPF3A-209ENST00000492270 CCDC169A6NNP5 214 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 HIDE1A8MVS5 230 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 N4BP3O15049 544 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 NCK2O43639 380 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 GUCY2CP25092 1073 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 CACNB1Q02641 598 aaPredicted RBP27.21■■□□□ 1.95
UPF3A-209ENST00000492270 KARSQ15046 597 aaKnown RBP27.21■■□□□ 1.95
UPF3A-209ENST00000492270 CLUL1Q15846 466 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 SPECC1Q5M775 1068 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 CALML4Q96GE6 196 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 IGSF21Q96ID5 467 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 USP28Q96RU2 1077 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 TLE6Q9H808 572 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 KLK14Q9P0G3 267 aa27.21■■□□□ 1.95
UPF3A-209ENST00000492270 C5orf42Q9H799 3197 aa27.2■■□□□ 1.95
UPF3A-209ENST00000492270 NPHP3-ACAD11A0A0J9YXS1 232 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 INPPL1O15357 1258 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 GLP2RO95838 553 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 IL9P15248 144 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 PLCG1P19174 1290 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 EFNA5P52803 228 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 RBM10P98175 930 aaKnown RBP27.2■■□□□ 1.94
UPF3A-209ENST00000492270 DMP1Q13316 513 aaPredicted RBP27.2■■□□□ 1.94
UPF3A-209ENST00000492270 NT5DC1Q5TFE4 455 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 PTCRAQ6ISU1 281 aaPredicted RBP27.2■■□□□ 1.94
UPF3A-209ENST00000492270 PDE12Q6L8Q7 609 aaKnown RBP27.2■■□□□ 1.94
UPF3A-209ENST00000492270 USP49Q70CQ1 688 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 TMC7Q7Z402 723 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 KCTD17Q8N5Z5 321 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 EFHBQ8N7U6 833 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 BLOC1S4Q9NUP1 217 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 KANSL3Q9P2N6 904 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 PARP2Q9UGN5 583 aa27.2■■□□□ 1.94
UPF3A-209ENST00000492270 FBXO2Q9UK22 296 aaPredicted RBP27.2■■□□□ 1.94
UPF3A-209ENST00000492270 PHLPP2Q6ZVD8 1323 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 BDP1A6H8Y1 2624 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 SLC26A4O43511 780 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 ARSHQ5FYA8 562 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 TAS1R3Q7RTX0 852 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 HACE1Q8IYU2 909 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 GSTCDQ8NEC7 633 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 VN1R2Q8NFZ6 395 aa27.19■■□□□ 1.94
UPF3A-209ENST00000492270 FAM193BQ96PV7 902 aaPredicted RBP27.19■■□□□ 1.94
UPF3A-209ENST00000492270 VN1R3Q9BXE9 311 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms