RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 GDPD5Q8WTR4 605 aa16.73■□□□□ 0.27
SS18L1-204ENST00000491916 ACO2Q99798 780 aaKnown RBP16.73■□□□□ 0.27
SS18L1-204ENST00000491916 NXF3Q9H4D5 531 aaKnown RBP16.73■□□□□ 0.27
SS18L1-204ENST00000491916 GDPD2Q9HCC8 539 aa16.73■□□□□ 0.27
SS18L1-204ENST00000491916 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
SS18L1-204ENST00000491916 HPSEQ9Y251 543 aa16.73■□□□□ 0.27
SS18L1-204ENST00000491916 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
SS18L1-204ENST00000491916 ATP6V1DQ9Y5K8 247 aa16.73■□□□□ 0.27
SS18L1-204ENST00000491916 PHLPP2Q6ZVD8 1323 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 FRMD3A2A2Y4 597 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 INPPL1O15357 1258 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 POLR2DO15514 142 aaKnown RBP16.72■□□□□ 0.27
SS18L1-204ENST00000491916 B4GALT3O60512 393 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 PROZP22891 400 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 CMA1P23946 247 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 STAMQ92783 540 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 DHX58Q96C10 678 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 SAMD11Q96NU1 681 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 SCAND2PQ9GZW5 306 aaPredicted RBP16.72■□□□□ 0.27
SS18L1-204ENST00000491916 PARVGQ9HBI0 331 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
SS18L1-204ENST00000491916 ATG2AQ2TAZ0 1938 aa16.72■□□□□ 0.27
SS18L1-204ENST00000491916 H3BNC9 293 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 HOXA2O43364 376 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 NPTXRO95502 500 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 LIG1P18858 919 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 CNNM4Q6P4Q7 775 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 HAUS6Q7Z4H7 955 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 MYCT1Q8N699 235 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 FBXO22Q8NEZ5 403 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 TARS2Q9BW92 718 aaKnown RBP16.71■□□□□ 0.27
SS18L1-204ENST00000491916 CXCL16Q9H2A7 254 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 MIOSQ9NXC5 875 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 KCNH3Q9ULD8 1083 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
SS18L1-204ENST00000491916 TNFSF13BQ9Y275 285 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 MTCH2Q9Y6C9 303 aa16.71■□□□□ 0.27
SS18L1-204ENST00000491916 A0A1B0GVL5 298 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 N4BP3O15049 544 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 ACTN4O43707 911 aaKnown RBP16.7■□□□□ 0.26
SS18L1-204ENST00000491916 TRAK2O60296 914 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 PPP1R37O75864 691 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 FAM13AO94988 1023 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 RB1P06400 928 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 PFKFB1P16118 471 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 NMT1P30419 496 aaKnown RBP16.7■□□□□ 0.26
SS18L1-204ENST00000491916 CTNNB1P35222 781 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
SS18L1-204ENST00000491916 CAMK1Q14012 370 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 NOMO2Q5JPE7 1267 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 SFR1Q86XK3 245 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 IQUBQ8NA54 791 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 ZBTB45Q96K62 511 aaPredicted RBP16.7■□□□□ 0.26
SS18L1-204ENST00000491916 FGFBP2Q9BYJ0 223 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 TNMDQ9H2S6 317 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 CUEDC2Q9H467 287 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 GOLPH3LQ9H4A5 285 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 ST6GALNAC4Q9H4F1 302 aa16.7■□□□□ 0.26
SS18L1-204ENST00000491916 A0A1W2PQ27 194 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 A0A1W2PQ64 194 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 A0A1W2PQD8 194 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 GRM6O15303 877 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 MEFVO15553 781 aaPredicted RBP16.69■□□□□ 0.26
SS18L1-204ENST00000491916 ITGB1P05556 798 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 FOSL2P15408 326 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 AKAP5P24588 427 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 DNAJB1P25685 340 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 SMTNP53814 917 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 GTF2BQ00403 316 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 ZNF720Q7Z2F6 126 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 ZNF280BQ86YH2 543 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 COLGALT1Q8NBJ5 622 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 P2RX5Q93086 422 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 C7orf25Q9BPX7 421 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 PLVAPQ9BX97 442 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 MRPL4Q9BYD3 311 aaKnown RBP16.69■□□□□ 0.26
SS18L1-204ENST00000491916 TRIM9Q9C026 710 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 NRDE2Q9H7Z3 1164 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 TBC1D13Q9NVG8 400 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 FAM13BQ9NYF5 915 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 KCNG1Q9UIX4 513 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 PLAGL2Q9UPG8 496 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 RWDD3Q9Y3V2 267 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 PLXNA4Q9HCM2 1894 aa16.69■□□□□ 0.26
SS18L1-204ENST00000491916 ARL5CA6NH57 179 aa16.68■□□□□ 0.26
SS18L1-204ENST00000491916 DDHD2O94830 711 aa16.68■□□□□ 0.26
SS18L1-204ENST00000491916 PIGRP01833 764 aa16.68■□□□□ 0.26
SS18L1-204ENST00000491916 KRT18P05783 430 aaKnown RBP16.68■□□□□ 0.26
SS18L1-204ENST00000491916 ITGA4P13612 1032 aa16.68■□□□□ 0.26
SS18L1-204ENST00000491916 CASP1P29466 404 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms