RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CDK5RAP3Q96JB5 506 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 CDHR1Q96JP9 859 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 CAMKK2Q96RR4 588 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 FOXB1Q99853 325 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 CROTQ9UKG9 612 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 KIF14Q15058 1648 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 UHRF1BP1Q6BDS2 1440 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 LRRIQ1Q96JM4 1722 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 USP47Q96K76 1375 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 GOLGA6L22H0YM25 854 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 RRP9O43818 475 aaKnown RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 NUAK1O60285 661 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 KDM1AO60341 852 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 U2AF1L5P0DN76 240 aaPredicted RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 SRGNP10124 158 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 TRIM27P14373 513 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 LSP1P33241 339 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 BUD31P41223 144 aaPredicted RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 CLK1P49759 484 aaKnown RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 SESN3P58005 492 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 U2AF1Q01081 240 aaKnown RBP eCLIP5.53□□□□□ -1.52
RTN4-215ENST00000491592 CAP1Q01518 475 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 NUCB1Q02818 461 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 DLX2Q07687 328 aaPredicted RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 ADCY1Q08828 1119 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 BIRC3Q13489 604 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 PIN1Q13526 163 aaPredicted RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 LRRC32Q14392 662 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 TOMM20Q15388 145 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 FAM102BQ5T8I3 360 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 BROXQ5VW32 411 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 TSHZ3Q63HK5 1081 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 IQSEC1Q6DN90 963 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 LRSAM1Q6UWE0 723 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 SAPCD2Q86UD0 394 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 ZNF610Q8N9Z0 462 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 CCDC47Q96A33 483 aaKnown RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 PAWRQ96IZ0 340 aaKnown RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 TACO1Q9BSH4 297 aaKnown RBP5.53□□□□□ -1.52
RTN4-215ENST00000491592 AMNQ9BXJ7 453 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 SEZ6LQ9BYH1 1024 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.53□□□□□ -1.52
RTN4-215ENST00000491592 CDH19Q9H159 772 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 KCND1Q9NSA2 647 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 SLC45A1Q9Y2W3 748 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 KDM5CP41229 1560 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 DNMBPQ6XZF7 1577 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 BCORL1Q5H9F3 1711 aa5.53□□□□□ -1.52
RTN4-215ENST00000491592 SYNRGQ9UMZ2 1314 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 LCHNA4D1U4 455 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 CYP7B1O75881 506 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 FBXO21O94952 628 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 IL18BPO95998 194 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 TGFB3P10600 412 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 HALP42357 657 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 ECE1P42892 770 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 AFF3P51826 1226 aaKnown RBP5.52□□□□□ -1.53
RTN4-215ENST00000491592 IL13RA1P78552 427 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 SLC6A3Q01959 620 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 ROM1Q03395 351 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 BECN1Q14457 450 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 TTC38Q5R3I4 469 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 PRR31Q5SQ13 230 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 PRAMEF9Q5VWM5 478 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 SLFN12LQ6IEE8 588 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 MORC1Q86VD1 984 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 PHYKPLQ8IUZ5 450 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 STPG3Q8N7X2 389 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 CALML6Q8TD86 181 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 ATRIPQ8WXE1 791 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 ZCCHC14Q8WYQ9 949 aaKnown RBP5.52□□□□□ -1.53
RTN4-215ENST00000491592 DACT3Q96B18 629 aaPredicted RBP5.52□□□□□ -1.53
RTN4-215ENST00000491592 POFUT1Q9H488 388 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 GALNT8Q9NY28 637 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 C9orf78Q9NZ63 289 aaPredicted RBP5.52□□□□□ -1.53
RTN4-215ENST00000491592 USP36Q9P275 1121 aaKnown RBP5.52□□□□□ -1.53
RTN4-215ENST00000491592 MSRAQ9UJ68 235 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 ARHGEF12Q9NZN5 1544 aa5.52□□□□□ -1.53
RTN4-215ENST00000491592 RALGAPBQ86X10 1494 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 E9PCH4 1651 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.51□□□□□ -1.53
RTN4-215ENST00000491592 PRKD3O94806 890 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 ZNF28P17035 718 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 RPL13P26373 211 aaKnown RBP5.51□□□□□ -1.53
RTN4-215ENST00000491592 CCT5P48643 541 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 RGS3P49796 1198 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 WASHC5Q12768 1159 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 KIF22Q14807 665 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 MYBPC3Q14896 1274 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 SEPT2Q15019 361 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 WDR45BQ5MNZ6 344 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 JAKMIP3Q5VZ66 844 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 IL31Q6EBC2 164 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 CFAP161Q6P656 301 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 TRMT10BQ6PF06 316 aaKnown RBP5.51□□□□□ -1.53
RTN4-215ENST00000491592 RASSF3Q86WH2 238 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 MAGEB6Q8N7X4 407 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 PGBD4Q96DM1 585 aa5.51□□□□□ -1.53
RTN4-215ENST00000491592 MAML3Q96JK9 1138 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms