RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 FOXD4L4Q8WXT5 416 aaPredicted RBP17.66■□□□□ 0.42
PFDN6-207ENST00000491382 LARP4BQ92615 738 aaKnown RBP17.66■□□□□ 0.42
PFDN6-207ENST00000491382 RAD54LQ92698 747 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 SYMPKQ92797 1274 aaKnown RBP17.66■□□□□ 0.42
PFDN6-207ENST00000491382 EPSTI1Q96J88 318 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 SPG21Q9NZD8 308 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 LARSQ9P2J5 1176 aaKnown RBP17.66■□□□□ 0.42
PFDN6-207ENST00000491382 ODF2LQ9ULJ1 636 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 LZTS1Q9Y250 596 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 PRUNE2Q8WUY3 3088 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 CSPG5O95196 566 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 YEATS4O95619 227 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 PLS3P13797 630 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 BCAR1P56945 870 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 MRPS5P82675 430 aaKnown RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 BECN1Q14457 450 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 DHX8Q14562 1220 aaKnown RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 TCEAL5Q5H9L2 206 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 SPECC1Q5M775 1068 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 PDE12Q6L8Q7 609 aaKnown RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 CDR2LQ86X02 465 aaPredicted RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 LINC00301Q8NCQ3 95 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 MRPS27Q92552 414 aaKnown RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 FAM193BQ96PV7 902 aaPredicted RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 APOL6Q9BWW8 343 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 NXF3Q9H4D5 531 aaKnown RBP17.65■□□□□ 0.42
PFDN6-207ENST00000491382 PDZD7Q9H5P4 517 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 TMEM134Q9H6X4 195 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 TLR9Q9NR96 1032 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 BLOC1S4Q9NUP1 217 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 STK17AQ9UEE5 414 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 GIT1Q9Y2X7 761 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 ZMYM2Q9UBW7 1377 aa17.65■□□□□ 0.42
PFDN6-207ENST00000491382 REV3LO60673 3130 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 SFI1A8K8P3 1242 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 H0YCG3 227 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 SPTLC2O15270 562 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 NCK2O43639 380 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 PPP6R2O75170 966 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 DNAJB1P25685 340 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 PBX3P40426 434 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 CAMK1Q14012 370 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 DCAF4L1Q3SXM0 396 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 MICAL1Q8TDZ2 1067 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 SPIRE2Q8WWL2 714 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 TMEM169Q96HH4 297 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 CLIC6Q96NY7 704 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 NTPCRQ9BSD7 190 aaKnown RBP17.64■□□□□ 0.41
PFDN6-207ENST00000491382 GBP3Q9H0R5 595 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 ARHGAP28Q9P2N2 729 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 HES2Q9Y543 173 aa17.64■□□□□ 0.41
PFDN6-207ENST00000491382 ARL5CA6NH57 179 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 INPPL1O15357 1258 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 DDIT3P35638 169 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 MLH1P40692 756 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 STRN3Q13033 797 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 MCM6Q14566 821 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 TJAP1Q5JTD0 557 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 ATF7IP2Q5U623 682 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 RRAGBQ5VZM2 374 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 CCDC73Q6ZRK6 1079 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 USP49Q70CQ1 688 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 SLC39A11Q8N1S5 342 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 ASB2Q96Q27 587 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 GAD1Q99259 594 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 REEP2Q9BRK0 252 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 MRPL4Q9BYD3 311 aaKnown RBP17.63■□□□□ 0.41
PFDN6-207ENST00000491382 NRDE2Q9H7Z3 1164 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 UBE2ZQ9H832 354 aaPredicted RBP17.63■□□□□ 0.41
PFDN6-207ENST00000491382 TFIP11Q9UBB9 837 aaKnown RBP17.63■□□□□ 0.41
PFDN6-207ENST00000491382 PARP2Q9UGN5 583 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 CFAP45Q9UL16 551 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 A0A0C4DFX4 3053 aa17.63■□□□□ 0.41
PFDN6-207ENST00000491382 UNC80Q8N2C7 3258 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 TTLL13PA6NNM8 815 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 SLC16A4O15374 487 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 TBCAO75347 108 aaKnown RBP17.62■□□□□ 0.41
PFDN6-207ENST00000491382 FAM13AO94988 1023 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 POMCP01189 267 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 SCP2P22307 547 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 CACNB1Q02641 598 aaPredicted RBP17.62■□□□□ 0.41
PFDN6-207ENST00000491382 PKP1Q13835 747 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 BMS1Q14692 1282 aaKnown RBP17.62■□□□□ 0.41
PFDN6-207ENST00000491382 ARSHQ5FYA8 562 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 PABPC5Q96DU9 382 aaKnown RBP17.62■□□□□ 0.41
PFDN6-207ENST00000491382 RPS6KC1Q96S38 1066 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 TMEM175Q9BSA9 504 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 ENTPD7Q9NQZ7 604 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 TNFSF13BQ9Y275 285 aa17.62■□□□□ 0.41
PFDN6-207ENST00000491382 NPHP3-ACAD11A0A0J9YXS1 232 aa17.61■□□□□ 0.41
PFDN6-207ENST00000491382 FSD2A1L4K1 749 aa17.61■□□□□ 0.41
PFDN6-207ENST00000491382 NT5C1B-RDH14C9J2C7 533 aa17.61■□□□□ 0.41
PFDN6-207ENST00000491382 NR1I2O75469 434 aa17.61■□□□□ 0.41
PFDN6-207ENST00000491382 EDN1P05305 212 aa17.61■□□□□ 0.41
PFDN6-207ENST00000491382 GALTP07902 379 aa17.61■□□□□ 0.41
PFDN6-207ENST00000491382 AKAP5P24588 427 aa17.61■□□□□ 0.41
PFDN6-207ENST00000491382 IRS1P35568 1242 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms