RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 A0A1W2PQJ5 194 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 SMIM10L2AP0DMW4 78 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 SMIM10L2BP0DMW5 78 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 CKAP4Q07065 602 aaKnown RBP24.8■■□□□ 1.56
USF3-203ENST00000491165 COASYQ13057 564 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 MKRN4PQ13434 485 aaPredicted RBP24.8■■□□□ 1.56
USF3-203ENST00000491165 EMC2Q15006 297 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 FKBP15Q5T1M5 1219 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 UNC13DQ70J99 1090 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 ERGIC2Q96RQ1 377 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 VPS18Q9P253 973 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 GRIN2DO15399 1336 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 MCM3P25205 808 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 POLGP54098 1239 aaPredicted RBP24.8■■□□□ 1.56
USF3-203ENST00000491165 CDK17Q00537 523 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 GRIK4Q16099 956 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 LRRC71Q8N4P6 559 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 LMBR1Q8WVP7 490 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 IQCDQ96DY2 449 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 MTG1Q9BT17 334 aaPredicted RBP24.8■■□□□ 1.56
USF3-203ENST00000491165 ACBD3Q9H3P7 528 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 PANK4Q9NVE7 773 aa24.8■■□□□ 1.56
USF3-203ENST00000491165 MAFO75444 373 aaPredicted RBP24.79■■□□□ 1.56
USF3-203ENST00000491165 C22orf31O95567 290 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 ACLYP53396 1101 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 PPFIA1Q13136 1202 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 TMEM143Q96AN5 459 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 LRRC27Q9C0I9 530 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 ZHX3Q9H4I2 956 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 TBC1D7Q9P0N9 293 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 ZNF200P98182 395 aaPredicted RBP24.79■■□□□ 1.56
USF3-203ENST00000491165 FAM102BQ5T8I3 360 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 KIAA0895Q8NCT3 520 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 MMS19Q96T76 1030 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 LACRTQ9GZZ8 138 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 ATP6V0A4Q9HBG4 840 aa24.79■■□□□ 1.56
USF3-203ENST00000491165 IGKV6-21A0A0C4DH24 114 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 ANO9A1A5B4 782 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 LMAN1P49257 510 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 ZNF131P52739 623 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 NBPF20Q3BBV1 942 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 SFR1Q86XK3 245 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 PCSK9Q8NBP7 692 aaKnown RBP24.78■■□□□ 1.56
USF3-203ENST00000491165 SLC7A3Q8WY07 619 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 BSNDQ8WZ55 320 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 FIZ1Q96SL8 496 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 PCDHA2Q9Y5H9 948 aa24.78■■□□□ 1.56
USF3-203ENST00000491165 PVALEFA0A1B0GWK0 134 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 RCCD1A6NED2 376 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 ZEB2O60315 1214 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 KPNA6O60684 536 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 SRGAP2O75044 1071 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 GJB1P08034 283 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 HSP90B2PQ58FF3 399 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 KATNAL1Q9BW62 490 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 TSGA10Q9BZW7 698 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 OGDHLQ9ULD0 1010 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 ODF2LQ9ULJ1 636 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 N4BP1O75113 896 aaKnown RBP24.77■■□□□ 1.56
USF3-203ENST00000491165 KLRC1P26715 233 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 ADAM17P78536 824 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 ZNF484Q5JVG2 852 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 CENPPQ6IPU0 288 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 MCOLN1Q9GZU1 580 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 SEMA6BQ9H3T3 888 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 SLC39A2Q9NP94 309 aa24.77■■□□□ 1.56
USF3-203ENST00000491165 TARSL2A2RTX5 802 aaKnown RBP24.76■■□□□ 1.55
USF3-203ENST00000491165 CLCN3P51790 818 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 CASP5P51878 434 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 VAV2P52735 878 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 MAP9Q49MG5 647 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 HERC4Q5GLZ8 1057 aaPredicted RBP24.76■■□□□ 1.55
USF3-203ENST00000491165 FAM71BQ8TC56 605 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 CAPZA3Q96KX2 299 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 HOXC8P31273 242 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 MNX1P50219 401 aaPredicted RBP24.76■■□□□ 1.55
USF3-203ENST00000491165 KIF5AQ12840 1032 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 ZSCAN26Q16670 478 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 MTHFD1LQ6UB35 978 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 U2AF1L4Q8WU68 220 aaKnown RBP24.76■■□□□ 1.55
USF3-203ENST00000491165 CCDC42Q96M95 316 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 PARVGQ9HBI0 331 aa24.76■■□□□ 1.55
USF3-203ENST00000491165 COL1A2P08123 1366 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 NRCAMQ92823 1304 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 A0A1W2PQ45 241 aaPredicted RBP24.75■■□□□ 1.55
USF3-203ENST00000491165 A0A1W2PQY0 241 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 LRRIQ3A6PVS8 624 aaPredicted RBP24.75■■□□□ 1.55
USF3-203ENST00000491165 TBCAO75347 108 aaKnown RBP24.75■■□□□ 1.55
USF3-203ENST00000491165 RFC5P40937 340 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 SPA17Q15506 151 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 EFCAB12Q6NXP0 572 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 CCDC65Q8IXS2 484 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 LINC01465Q8N7H1 131 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 MCPH1Q8NEM0 835 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 POLR3FQ9H1D9 316 aaPredicted RBP24.75■■□□□ 1.55
USF3-203ENST00000491165 VIPAS39Q9H9C1 493 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 MED4Q9NPJ6 270 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 RNF216Q9NWF9 866 aaPredicted RBP24.75■■□□□ 1.55
USF3-203ENST00000491165 FAN1Q9Y2M0 1017 aa24.75■■□□□ 1.55
USF3-203ENST00000491165 TREHO43280 583 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms