RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 DNAAF5Q86Y56 855 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 REXO1L1PQ8IX06 675 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 LOXHD1Q8IVV2 1947 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 MSCO60682 206 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 TNNT1P13805 278 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 CCND3P30281 292 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-219ENST00000491128 TMEM132AQ24JP5 1023 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 KIZQ2M2Z5 673 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 CYP26C1Q6V0L0 522 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 GBP6Q6ZN66 633 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 MSL3Q8N5Y2 521 aaKnown RBP15.16■□□□□ 0.02
SMPD4-219ENST00000491128 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 FAM212AQ96EL1 285 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 SCLT1Q96NL6 688 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 GANQ9H2C0 597 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 SIX2Q9NPC8 291 aa15.16■□□□□ 0.02
SMPD4-219ENST00000491128 R3HCC1Q9Y3T6 440 aaKnown RBP15.16■□□□□ 0.02
SMPD4-219ENST00000491128 LRRIQ3A6PVS8 624 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 UCHL3P15374 230 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 TRIM65Q6PJ69 517 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 CEP120Q8N960 986 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 ZNF397Q8NF99 534 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 CPB2Q96IY4 423 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 NHEJ1Q9H9Q4 299 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 CDHR5Q9HBB8 845 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 IFT122Q9HBG6 1241 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 PDE11AQ9HCR9 933 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 ARHGAP20Q9P2F6 1191 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 TRIM10Q9UDY6 481 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 AGO2Q9UKV8 859 aaKnown RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 ALDH1A1P00352 501 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 PRKCBP05771 671 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 SMIM10L2AP0DMW4 78 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 SMIM10L2BP0DMW5 78 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 MYL7Q01449 175 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 CACNB2Q08289 660 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 MXD4Q14582 209 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 ZNF484Q5JVG2 852 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 KLHDC7AQ5VTJ3 777 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 INTS8Q75QN2 995 aaKnown RBP15.15■□□□□ 0.02
SMPD4-219ENST00000491128 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 RETREG2Q8NC44 543 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 TCP11Q8WWU5 503 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 NLRP7Q8WX94 980 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 MSTO1Q9BUK6 570 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 TMEM117Q9H0C3 514 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 AP5M1Q9H0R1 490 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 ADGRG1Q9Y653 693 aa15.15■□□□□ 0.02
SMPD4-219ENST00000491128 FSCN1Q16658 493 aaKnown RBP15.14■□□□□ 0.01
SMPD4-219ENST00000491128 GNASQ5JWF2 1037 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 PDXDC1Q6P996 788 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 CXCL17Q6UXB2 119 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 CRELD2Q6UXH1 353 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-219ENST00000491128 RUFY4Q6ZNE9 571 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 C12orf56Q8IXR9 622 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 KAT5Q92993 513 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 EVPLQ92817 2033 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 PTPRJQ12913 1337 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 MFSD10Q14728 455 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 PTPN14Q15678 1187 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 MAPK6Q16659 721 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 ARHGAP44Q17R89 818 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 NFRKBQ6P4R8 1299 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 TMTC1Q8IUR5 882 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 THNSL1Q8IYQ7 743 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 HVCN1Q96D96 273 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
SMPD4-219ENST00000491128 ZNHIT6Q9NWK9 470 aaKnown RBP15.14■□□□□ 0.01
SMPD4-219ENST00000491128 REXO2Q9Y3B8 237 aaKnown RBP15.14■□□□□ 0.01
SMPD4-219ENST00000491128 A0A1W2PQJ5 194 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 CLDN3O15551 220 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 TREHO43280 583 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 IGHA2P01877 340 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 AKR1A1P14550 325 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 CYP24A1Q07973 514 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 TDRD12Q587J7 1177 aaKnown RBP15.13■□□□□ 0.01
SMPD4-219ENST00000491128 FIGNQ5HY92 759 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 IQCEQ6IPM2 695 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 PHLDB3Q6NSJ2 640 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 TMEM192Q8IY95 271 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 SEMA4DQ92854 862 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 SPAG5Q96R06 1193 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 INTS2Q9H0H0 1204 aaKnown RBP15.13■□□□□ 0.01
SMPD4-219ENST00000491128 CEP72Q9P209 647 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 PLAGL2Q9UPG8 496 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 EPN1Q9Y6I3 576 aaPredicted RBP15.13■□□□□ 0.01
SMPD4-219ENST00000491128 NDUFA10O95299 355 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 F2P00734 622 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 CYBAP13498 195 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 EIF4A3P38919 411 aaKnown RBP15.13■□□□□ 0.01
SMPD4-219ENST00000491128 SYT10Q6XYQ8 523 aa15.13■□□□□ 0.01
SMPD4-219ENST00000491128 ARHGEF19Q8IW93 802 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms