RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TTLL13PA6NNM8 815 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 HIP1RO75146 1068 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 ZC3H11AO75152 810 aaKnown RBP eCLIP16.79■□□□□ 0.286e-9■□□□□ 10
COL27A1-206ENST00000490831 PRKCBP05771 671 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 SLC12A3P55017 1021 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 RNASELQ05823 741 aaKnown RBP16.79■□□□□ 0.28
COL27A1-206ENST00000490831 PRPF4BQ13523 1007 aaKnown RBP16.79■□□□□ 0.28
COL27A1-206ENST00000490831 TMEM173Q86WV6 379 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-206ENST00000490831 ZNF280BQ86YH2 543 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 HACE1Q8IYU2 909 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 IGSF21Q96ID5 467 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 CDCA3Q99618 268 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-206ENST00000490831 TMEM175Q9BSA9 504 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-206ENST00000490831 NXF3Q9H4D5 531 aaKnown RBP16.79■□□□□ 0.28
COL27A1-206ENST00000490831 PDZD7Q9H5P4 517 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 POLD4Q9HCU8 107 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 HES2Q9Y543 173 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 CLIC4Q9Y696 253 aa16.79■□□□□ 0.28
COL27A1-206ENST00000490831 GRXCR2A6NFK2 248 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 ARL5CA6NH57 179 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 NT5C1B-RDH14C9J2C7 533 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 H3BQ06 376 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-206ENST00000490831 N4BP3O15049 544 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 STX6O43752 255 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 TBX10O75333 385 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 DDHD2O94830 711 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 CSPG5O95196 566 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 NPTXRO95502 500 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 EDN1P05305 212 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 NPTX2P47972 431 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 NRIP1P48552 1158 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 SLC11A1P49279 550 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 GRIN1Q05586 938 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 DLX2Q07687 328 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-206ENST00000490831 DSC1Q08554 894 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 DDX53Q86TM3 631 aaKnown RBP16.78■□□□□ 0.28
COL27A1-206ENST00000490831 CDR2LQ86X02 465 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-206ENST00000490831 GSTCDQ8NEC7 633 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 MICAL1Q8TDZ2 1067 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 TMEM169Q96HH4 297 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 CDK5RAP3Q96JB5 506 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 GAD1Q99259 594 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 TCF25Q9BQ70 676 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 NTPCRQ9BSD7 190 aaKnown RBP16.78■□□□□ 0.28
COL27A1-206ENST00000490831 KIFC3Q9BVG8 833 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 ZSCAN16Q9H4T2 348 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-206ENST00000490831 TMEM134Q9H6X4 195 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 ARHGAP28Q9P2N2 729 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 DNAJB4Q9UDY4 337 aa16.78■□□□□ 0.28
COL27A1-206ENST00000490831 PHLPP2Q6ZVD8 1323 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 TNFRSF10AO00220 468 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 LINC01565O15544 149 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 PLA2G4BP0C869 781 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 MLH1P40692 756 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 UBA7P41226 1012 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 PEX3P56589 373 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 DMP1Q13316 513 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-206ENST00000490831 KCNC3Q14003 757 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 ZRSR1Q15695 479 aaKnown RBP16.77■□□□□ 0.28
COL27A1-206ENST00000490831 DUSP6Q16828 381 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 PTCRAQ6ISU1 281 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-206ENST00000490831 COLGALT2Q8IYK4 626 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 LRRC15Q8TF66 581 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-206ENST00000490831 SPIRE2Q8WWL2 714 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 KCNN1Q92952 543 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 CALML4Q96GE6 196 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 MSLNLQ96KJ4 702 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 CCSER1Q9C0I3 900 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 ZBP1Q9H171 429 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 IGFLR1Q9H665 355 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 TLE6Q9H808 572 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 STK39Q9UEW8 545 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
COL27A1-206ENST00000490831 IRAK3Q9Y616 596 aa16.77■□□□□ 0.28
COL27A1-206ENST00000490831 GLP2RO95838 553 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 POMCP01189 267 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
COL27A1-206ENST00000490831 ARSHQ5FYA8 562 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 NT5DC1Q5TFE4 455 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 PLPP4Q5VZY2 271 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 TMEM184AQ6ZMB5 413 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 TAS1R3Q7RTX0 852 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 TMC7Q7Z402 723 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 RBM23Q86U06 439 aaKnown RBP16.76■□□□□ 0.27
COL27A1-206ENST00000490831 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 MRPL43Q8N983 215 aaKnown RBP16.76■□□□□ 0.27
COL27A1-206ENST00000490831 ZFP42Q96MM3 310 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 NECAB3Q96P71 396 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-206ENST00000490831 PLIN2Q99541 437 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 GBP3Q9H0R5 595 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 BLOC1S4Q9NUP1 217 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 MIOSQ9NXC5 875 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 CLEC1BQ9P126 229 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 KCNG1Q9UIX4 513 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 FBXO2Q9UK22 296 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms