RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SPIRE1Q08AE8 756 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 HYAL1Q12794 435 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 CTTNQ14247 550 aaKnown RBP8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 ANKRD1Q15327 319 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 EPHA7Q15375 998 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 LONRF3Q496Y0 759 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 XKR3Q5GH77 459 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 PPP1R26Q5T8A7 1209 aaPredicted RBP8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 NCAPH2Q6IBW4 605 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 PPP4R3AQ6IN85 833 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 MOXD1Q6UVY6 613 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 EP400NLQ6ZTU2 488 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 CMTR2Q8IYT2 770 aaKnown RBP8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 TMEM143Q96AN5 459 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 FAM167AQ96KS9 214 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 FDXACB1Q9BRP7 624 aaPredicted RBP8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 FTHL17Q9BXU8 183 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 TMEM60Q9H2L4 133 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 CWH43Q9H720 699 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 TYW1Q9NV66 732 aaKnown RBP8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 TCEAL9Q9UHQ7 104 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 LRFN2Q9ULH4 789 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 KIAA1671Q9BY89 1806 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 CFAP54Q96N23 3096 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 DENND3A2RUS2 1198 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 FIGNL2A6NMB9 653 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 MEIS3P2A8K0S8 358 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 MAFO75444 373 aaPredicted RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 SLITRK3O94933 977 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 STAG3L1P0CL83 205 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 DARSP14868 501 aaKnown RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 ATF7P17544 494 aaPredicted RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 EIF4BP23588 611 aaKnown RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 PBX3P40426 434 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 ERVFC1P60507 584 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 PSMC5P62195 406 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 RBM10P98175 930 aaKnown RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 CYP4A11Q02928 519 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 TBC1D8BQ0IIM8 1120 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 CBLBQ13191 982 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 PPP2R5CQ13362 524 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 CLUL1Q15846 466 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 ZNF385CQ66K41 422 aaPredicted RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 SLC24A5Q71RS6 500 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 ECHDC2Q86YB7 292 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 DIS3L2Q8IYB7 885 aaKnown RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 PRSS33Q8NF86 280 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 RDM1Q8NG50 284 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 POF1BQ8WVV4 589 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 LPPQ93052 612 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 FAM20AQ96MK3 541 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 CASD1Q96PB1 797 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 MINDY3Q9H8M7 445 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 SUCLA2Q9P2R7 463 aaPredicted RBP8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 CEP131Q9UPN4 1083 aa8.2□□□□□ -1.1
PRPF4B-208ENST00000490653 RALGAPA2Q2PPJ7 1873 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 MYO15AQ9UKN7 3530 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 NT5C1B-RDH14C9J2C7 533 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 PER2O15055 1255 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 MARCH6O60337 910 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 MMP1P03956 469 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 RPLP2P05387 115 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 CENPBP07199 599 aaPredicted RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 TMOD1P28289 359 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 TXKP42681 527 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 QARSP47897 775 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 AFF1P51825 1210 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 ZNF174Q15697 407 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 PTPROQ16827 1216 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 CLLU1OSQ5K130 101 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 SPOUT1Q5T280 376 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 RBM23Q86U06 439 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 RHPN2Q8IUC4 686 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 TPH2Q8IWU9 490 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 RNF169Q8NCN4 708 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 CEP170P1Q96L14 293 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 MTMR9Q96QG7 549 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 MAP7D2Q96T17 732 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 EIF2AK1Q9BQI3 630 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 NSUN3Q9H649 340 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 ATP6V0A4Q9HBG4 840 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 POLD4Q9HCU8 107 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 CLDND1Q9NY35 253 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 LIMCH1Q9UPQ0 1083 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 PLXNA4Q9HCM2 1894 aa8.19□□□□□ -1.1
PRPF4B-208ENST00000490653 TECTAO75443 2155 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 DCXO43602 365 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 TBX10O75333 385 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 SRGAP2CP0DJJ0 459 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 GCFC2P16383 781 aaKnown RBP8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 XBP1P17861 261 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 ADAM15Q13444 863 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 XKR9Q5GH70 373 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 RNFT1Q5M7Z0 435 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 C4orf19Q8IY42 314 aa8.18□□□□□ -1.1
PRPF4B-208ENST00000490653 FAM177A1Q8N128 213 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms