RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RAB27AP51159 221 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 CCDC6Q16204 474 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 ZNF654Q8IZM8 581 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 PLA2G2FQ9BZM2 168 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 PCDHB2Q9Y5E7 798 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 AKAP13Q12802 2813 aa15.46■□□□□ 0.07
EXOSC3-207ENST00000490516 DSPP15924 2871 aaKnown RBP15.46■□□□□ 0.06
EXOSC3-207ENST00000490516 TICRRQ7Z2Z1 1910 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 A0A087WZ62 844 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 FOXD2O60548 495 aaPredicted RBP15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 SPINK2P20155 84 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 SFPQP23246 707 aaKnown RBP eCLIP15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 ZNF76P36508 570 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 SATB1Q01826 763 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 PPP2R5DQ14738 602 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 SART3Q15020 963 aaKnown RBP15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 HEATR3Q7Z4Q2 680 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 FAM160A2Q8N612 972 aaPredicted RBP15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 IGDCC4Q8TDY8 1250 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 PGBD4Q96DM1 585 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 MAP3K14Q99558 947 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 FDXACB1Q9BRP7 624 aaPredicted RBP15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 TMEM121BQ9BXQ6 578 aaPredicted RBP15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 ANO3Q9BYT9 981 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 IL25Q9H293 177 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 RSAD1Q9HA92 442 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 TAF6LQ9Y6J9 622 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 F5P12259 2224 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 COL4A2P08572 1712 aa15.45■□□□□ 0.06
EXOSC3-207ENST00000490516 SPAG17Q6Q759 2223 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 FAM86B1E9PN63 330 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 IPO5O00410 1097 aaKnown RBP15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 ZNF862O60290 1169 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 C1RP00736 705 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 PSAPP07602 524 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 FAM86B2P0C5J1 330 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 ANTXR2P58335 489 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 STPG1Q5TH74 334 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 PSAPL1Q6NUJ1 521 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 COLGALT2Q8IYK4 626 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 CCDC82Q8N4S0 544 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 FAM167AQ96KS9 214 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 LZTS2Q9BRK4 669 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 CHST7Q9NS84 486 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 PCDHA10Q9Y5I2 948 aa15.44■□□□□ 0.06
EXOSC3-207ENST00000490516 CCL16O15467 120 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 DDAH1O94760 285 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 OATP04181 439 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 RXRAP19793 462 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 CCR3P51677 355 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 FOXC1Q12948 553 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 ZNF746Q6NUN9 644 aaPredicted RBP15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 NIPA1Q7RTP0 329 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 CATSPER4Q7RTX7 472 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 NPAS3Q8IXF0 933 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 C12orf50Q8NA57 414 aaPredicted RBP15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 ING5Q8WYH8 240 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 LSM14BQ9BX40 385 aaKnown RBP15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 GPR62Q9BZJ7 368 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 LMAN1LQ9HAT1 526 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 POLIQ9UNA4 740 aa15.43■□□□□ 0.06
EXOSC3-207ENST00000490516 PDCD11Q14690 1871 aaKnown RBP15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 IGLV3-22A0A075B6J6 115 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 AXIN1O15169 862 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 TOP3BO95985 862 aaKnown RBP15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 CYP21A2P08686 494 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 SREBF1P36956 1147 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 CXCL12P48061 93 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 HEATR6Q6AI08 1181 aaKnown RBP15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 TYW1BQ6NUM6 668 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 RALYLQ86SE5 291 aaKnown RBP15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 SMAP1Q8IYB5 467 aaPredicted RBP15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 MBOAT7Q96N66 472 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 ARRDC1-AS1Q9H2J1 176 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 NRBP2Q9NSY0 501 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 HCFC1R1Q9NWW0 138 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 FBXW11Q9UKB1 542 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 SAMM50Q9Y512 469 aa15.42■□□□□ 0.06
EXOSC3-207ENST00000490516 LAMA1P25391 3075 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 ECI2O75521 394 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 FOSP01100 380 aaPredicted RBP15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 GNAQP50148 359 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 PRKCEQ02156 737 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 GAS6Q14393 721 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 UGCGQ16739 394 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 PPM1LQ5SGD2 360 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 WWC2Q6AWC2 1192 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 PRSS55Q6UWB4 352 aaPredicted RBP15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 CEP68Q76N32 757 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 RAB11FIP4Q86YS3 637 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 NCOA7Q8NI08 942 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 ADAM33Q9BZ11 813 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 RIC8AQ9NPQ8 531 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms