RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 CLUHO75153 1309 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 EVPLQ92817 2033 aa8.2□□□□□ -1.1
PDLIM1-203ENST00000490391 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 SMARCA5O60264 1052 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 LILRB3O75022 631 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 ATP9AO75110 1047 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 KCNA2P16389 499 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 BCAR1P56945 870 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 GPC5P78333 572 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 SNW1Q13573 536 aaKnown RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 GIT2Q14161 759 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 ALX1Q15699 326 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 MLF2Q15773 248 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 SOWAHCQ53LP3 525 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 ASPRV1Q53RT3 343 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 DDX53Q86TM3 631 aaKnown RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 FAM228AQ86W67 206 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 PPFIBP1Q86W92 1011 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 FCHSD1Q86WN1 690 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 NME8Q8N427 588 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 PNMA1Q8ND90 353 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 ST13P5Q8NFI4 369 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 SEPT1Q8WYJ6 367 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 GATA6Q92908 595 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 ZNF707Q96C28 371 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 TMEM169Q96HH4 297 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 RPP25Q9BUL9 199 aaKnown RBP8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 VAT1LQ9HCJ6 419 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 LTB4R2Q9NPC1 389 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 TOMM22Q9NS69 142 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 RTEL1Q9NZ71 1219 aa8.19□□□□□ -1.1
PDLIM1-203ENST00000490391 PIEZO2Q9H5I5 2752 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 TMEM8BA6NDV4 472 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 SHISA7A6NL88 538 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 GCOM1H8Y6P7 765 aaPredicted RBP8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 HMMRO75330 724 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 KCNK5O95279 499 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 CNPP09543 421 aaKnown RBP8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 POLR2MP0CAP2 368 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 CD72P21854 359 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 TARSP26639 723 aaKnown RBP8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 CTHP32929 405 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 RPS9P46781 194 aaKnown RBP8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 PRKCQQ04759 706 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 UBXN2BQ14CS0 331 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 PLCB4Q15147 1175 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 SLC35G1Q2M3R5 365 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 IL31Q6EBC2 164 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 CYP26C1Q6V0L0 522 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 DGKHQ86XP1 1220 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 GPIHBP1Q8IV16 184 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 KIAA0319LQ8IZA0 1049 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 CELF5Q8N6W0 485 aaKnown RBP8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 STAMQ92783 540 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 FGF14Q92915 247 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 IGSF21Q96ID5 467 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 KLHL5Q96PQ7 755 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 MYL10Q9BUA6 226 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 SMARCAD1Q9H4L7 1026 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 MAN1C1Q9NR34 630 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 RXFP3Q9NSD7 469 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 RAB23Q9ULC3 237 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 GINS2Q9Y248 185 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 PTPN13Q12923 2485 aa8.18□□□□□ -1.1
PDLIM1-203ENST00000490391 ZBTB5O15062 677 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 GPR182O15218 404 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 SPINT1O43278 529 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 DHX16O60231 1041 aaKnown RBP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 FOXD2O60548 495 aaPredicted RBP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 RFPL2O75678 378 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 FGAP02671 866 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 NCLP19338 710 aaKnown RBP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 ALDH7A1P49419 539 aaKnown RBP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 MTAPQ13126 283 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 BMS1Q14692 1282 aaKnown RBP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 SLC44A4Q53GD3 710 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 MTHFD1LQ6UB35 978 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 RSPO2Q6UXX9 243 aaPredicted RBP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 ECHDC2Q86YB7 292 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 GIMAP8Q8ND71 665 aaPredicted RBP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 HELQQ8TDG4 1101 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 ZKSCAN3Q9BRR0 538 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 LRRCC1Q9C099 1032 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 ADAMTS20P59510 1910 aa8.17□□□□□ -1.1
PDLIM1-203ENST00000490391 TEX15Q9BXT5 2789 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 CCDC195A0A1B0GUA6 201 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 KLRC2P26717 231 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 NEDD4P46934 1319 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 CCDC6Q16204 474 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 ZBTB41Q5SVQ8 909 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 ODR4Q5SWX8 454 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 PCNX4Q63HM2 1172 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 PARM1Q6UWI2 310 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 PRR23BQ6ZRT6 265 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 TBC1D10CQ8IV04 446 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms