RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 SMNDC1O75940 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 CSF2RAP15509 400 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 CYP3A7P24462 503 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 TCF7P36402 384 aaPredicted RBP11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 ZNF76P36508 570 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 TMEM240Q5SV17 173 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 RASIP1Q5U651 963 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 C7orf31Q8N865 590 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 CAGE1Q8TC20 777 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 WASF1Q92558 559 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 MBOAT7Q96N66 472 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 RNPEPQ9H4A4 650 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 GJB4Q9NTQ9 266 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 SALL4Q9UJQ4 1053 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 KCNJ14Q9UNX9 436 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 EMSYQ7Z589 1322 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 SMIM10L2AP0DMW4 78 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 SMIM10L2BP0DMW5 78 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 XBP1P17861 261 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 NOS3P29474 1203 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 CCL23P55773 120 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 ACTR2P61160 394 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 ZNF200P98182 395 aaPredicted RBP11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 SP4Q02446 784 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 BFSP2Q13515 415 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 GPNMBQ14956 572 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 RABEP1Q15276 862 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 UTP14CQ5TAP6 766 aaKnown RBP11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 MOXD1Q6UVY6 613 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 ABHD15Q6UXT9 468 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 TBCKQ8TEA7 893 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 WFDC12Q8WWY7 111 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 POP1Q99575 1024 aaKnown RBP11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 SDF4Q9BRK5 362 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 SMARCAD1Q9H4L7 1026 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 ZNF215Q9UL58 517 aaPredicted RBP11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 CEP290O15078 2479 aa11.28□□□□□ -0.6
AC055748.1-201ENST00000489836 C17orf102A2RUQ5 167 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 IPO5O00410 1097 aaKnown RBP11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 JAK2O60674 1132 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 CCNE2O96020 404 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 IQCF3P0C7M6 154 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 RFC2P35250 354 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 CHMP4BP1P59074 171 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 Q4G0T1 1027 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 ZNF365Q70YC5 407 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 PLPPR4Q7Z2D5 763 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 SERINC5Q86VE9 423 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 RPUSD2Q8IZ73 545 aaKnown RBP11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 GALNT11Q8NCW6 608 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 AFAP1L1Q8TED9 768 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 HERVK_113Q902F9 699 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 WNT8BQ93098 351 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 SCLYQ96I15 445 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 TBC1D32Q96NH3 1257 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 HHIPQ96QV1 700 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 LLPHQ9BRT6 129 aaKnown RBP11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 ZNF577Q9BSK1 485 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 TBC1D22BQ9NU19 505 aa11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.61
AC055748.1-201ENST00000489836 LAMA3Q16787 3333 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 MSH4O15457 936 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 TREHO43280 583 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 DYRK3O43781 588 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 ALX3O95076 343 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 FGBP02675 491 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 PFKMP08237 780 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 ACRP10323 421 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 CKBP12277 381 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 PRR16Q569H4 304 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 ZNF746Q6NUN9 644 aaPredicted RBP11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 PSRC1Q6PGN9 363 aaPredicted RBP11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 B3GNT9Q6UX72 402 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 SLC5A5Q92911 643 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 TP53INP1Q96A56 240 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 UPF2Q9HAU5 1272 aaKnown RBP11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 ERAP1Q9NZ08 941 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 NRCAMQ92823 1304 aa11.26□□□□□ -0.61
AC055748.1-201ENST00000489836 DOCK5Q9H7D0 1870 aa11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 MBLAC1A4D2B0 266 aaPredicted RBP11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 EREGO14944 169 aa11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 TNFRSF21O75509 655 aa11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 PSMD10O75832 226 aa11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 PARNO95453 639 aaKnown RBP11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 TDP2O95551 362 aa11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 CXCL10P02778 98 aa11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 MMP1P03956 469 aa11.25□□□□□ -0.61
AC055748.1-201ENST00000489836 GNAT1P11488 350 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms