RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ANO5Q75V66 913 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 POMGNT1Q8WZA1 660 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 MAGOHBQ96A72 148 aaKnown RBP16.94■□□□□ 0.3
BRD9-208ENST00000489816 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 GABBR1Q9UBS5 961 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 VCAM1P19320 739 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 HSPA9P38646 679 aaKnown RBP16.94■□□□□ 0.3
BRD9-208ENST00000489816 SEZ6Q53EL9 994 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 NBPF12Q5TAG4 269 aaPredicted RBP16.94■□□□□ 0.3
BRD9-208ENST00000489816 FBXO25Q8TCJ0 367 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 BICD1Q96G01 975 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
BRD9-208ENST00000489816 ATP2C2O75185 946 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 PYGMP11217 842 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 NPTX2P47972 431 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 MAGOHP61326 146 aaKnown RBP16.93■□□□□ 0.3
BRD9-208ENST00000489816 SWSAP1Q6NVH7 229 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 ZNRF3Q9ULT6 936 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 DAAM1Q9Y4D1 1078 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 HARSP12081 509 aaKnown RBP16.93■□□□□ 0.3
BRD9-208ENST00000489816 GJC1P36383 396 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 VPS41P49754 854 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 TRIP13Q15645 432 aaPredicted RBP16.93■□□□□ 0.3
BRD9-208ENST00000489816 DLK2Q6UY11 383 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 EPS8L1Q8TE68 723 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 FMO2Q99518 471 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 FAM213AQ9BRX8 229 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 STRA6Q9BX79 667 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 CNOT8Q9UFF9 292 aaKnown RBP16.93■□□□□ 0.3
BRD9-208ENST00000489816 CHRNB2P17787 502 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 ZNF653Q96CK0 615 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 TMEM206Q9H813 350 aa16.93■□□□□ 0.3
BRD9-208ENST00000489816 A0A0A6YYK5 440 aaPredicted RBP16.92■□□□□ 0.3
BRD9-208ENST00000489816 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 CCDC188H7C350 402 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 HNRNPDLO14979 420 aaKnown RBP16.92■□□□□ 0.3
BRD9-208ENST00000489816 CCDC172P0C7W6 258 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 NF2P35240 595 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 CUL1Q13616 776 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
BRD9-208ENST00000489816 SPOPLQ6IQ16 392 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 TMC3Q7Z5M5 1100 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 RASGEF1CQ8N431 466 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 RUBCNQ92622 972 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 PDCD2LQ9BRP1 358 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 NUP85Q9BW27 656 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 TMBIM4Q9HC24 238 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 KMT5AQ9NQR1 393 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 H0YGN5 161 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 ZNF862O60290 1169 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 CORO7P57737 925 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 GPC5P78333 572 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 PACS2Q86VP3 889 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 PASD1Q8IV76 773 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 C1orf54Q8WWF1 131 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 LRRC45Q96CN5 670 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 CALR3Q96L12 384 aaKnown RBP16.92■□□□□ 0.3
BRD9-208ENST00000489816 CCDC113Q9H0I3 377 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 UBIAD1Q9Y5Z9 338 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 NFS1Q9Y697 457 aa16.92■□□□□ 0.3
BRD9-208ENST00000489816 KCNA3P22001 575 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 FGFR4P22455 802 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 KIF22Q14807 665 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 SCARA3Q6AZY7 606 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 TTC27Q6P3X3 843 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 RTKN2Q8IZC4 609 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 CPA5Q8WXQ8 436 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 TBX20Q9UMR3 447 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 TRPC6Q9Y210 931 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 ADGRA3Q8IWK6 1321 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 MDH1P40925 334 aaKnown RBP16.91■□□□□ 0.3
BRD9-208ENST00000489816 ACOT2P49753 483 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 HMGCS2P54868 508 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 JAMLQ86YT9 394 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 CCDC105Q8IYK2 499 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 ATP8B4Q8TF62 1192 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 BBXQ8WY36 941 aaPredicted RBP16.91■□□□□ 0.3
BRD9-208ENST00000489816 SLC38A10Q9HBR0 1119 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 RNF146Q9NTX7 359 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 SEPT9Q9UHD8 586 aaPredicted RBP16.91■□□□□ 0.3
BRD9-208ENST00000489816 INTUQ9ULD6 942 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 FOXO6A8MYZ6 492 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 MTERF2Q49AM1 385 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 PCNX4Q63HM2 1172 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 PRELID2Q8N945 189 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 ATG4AQ8WYN0 398 aa16.91■□□□□ 0.3
BRD9-208ENST00000489816 CAND2O75155 1236 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 ZBTB7AO95365 584 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 RXRBP28702 533 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 DMP1Q13316 513 aaPredicted RBP16.9■□□□□ 0.3
BRD9-208ENST00000489816 CCDC38Q502W7 563 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 MREGQ8N565 214 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 TMEM161BQ8NDZ6 487 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 ZNF668Q96K58 619 aaPredicted RBP16.9■□□□□ 0.3
BRD9-208ENST00000489816 CCT8L2Q96SF2 557 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 SEMA4AQ9H3S1 761 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 KCND2Q9NZV8 630 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 GOLGA6L10A0A0M3HER8 536 aa16.9■□□□□ 0.3
BRD9-208ENST00000489816 CLDN3O15551 220 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms