RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SWSAP1Q6NVH7 229 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 FAM3CQ92520 227 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 LOXL4Q96JB6 756 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 B3GALT6Q96L58 329 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 MXRA8Q9BRK3 442 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 TRAIPQ9BWF2 469 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 DCTPP1Q9H773 170 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 FAM105AQ9NUU6 356 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 LAMA1P25391 3075 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 HYAL3O43820 417 aaPredicted RBP17.06■□□□□ 0.32
UFD1-209ENST00000489406 ECI2O75521 394 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 C1RP00736 705 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 SKIP12755 728 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 RPL17P18621 184 aaKnown RBP17.06■□□□□ 0.32
UFD1-209ENST00000489406 TMOD1P28289 359 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 NMIQ13287 307 aaPredicted RBP17.06■□□□□ 0.32
UFD1-209ENST00000489406 SEC23AQ15436 765 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 UBE2SQ16763 222 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 NPAS3Q8IXF0 933 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 SPEM1Q8N4L4 309 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 LINC01465Q8N7H1 131 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 NLRP7Q8WX94 980 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 ING5Q8WYH8 240 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 DNASE1L2Q92874 299 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 EDEM2Q9BV94 578 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 NEUROG3Q9Y4Z2 214 aa17.06■□□□□ 0.32
UFD1-209ENST00000489406 CCL16O15467 120 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 MAGEB2O15479 319 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 POMCP01189 267 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 CHRNB1P11230 501 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 KIF5BP33176 963 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 OR1G1P47890 313 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 DAB2IPQ5VWQ8 1189 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 PROSER1Q86XN7 944 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 RNF168Q8IYW5 571 aaPredicted RBP17.05■□□□□ 0.32
UFD1-209ENST00000489406 BRD9Q9H8M2 597 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 AGO4Q9HCK5 861 aaKnown RBP17.05■□□□□ 0.32
UFD1-209ENST00000489406 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 MSRB2Q9Y3D2 182 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
UFD1-209ENST00000489406 SPDYE3A6NKU9 549 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 F8W810 466 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 EFEMP2O95967 443 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 CEACAM1P13688 526 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 MPLP40238 635 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 RAP1GAPP47736 663 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 TANGO2Q6ICL3 276 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 AGMOQ6ZNB7 445 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 KBTBD6Q86V97 674 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 MCRS1Q96EZ8 462 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 VPS45Q9NRW7 570 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 CHST7Q9NS84 486 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 KLK13Q9UKR3 277 aa17.04■□□□□ 0.32
UFD1-209ENST00000489406 PIN4Q9Y237 131 aaKnown RBP17.04■□□□□ 0.32
UFD1-209ENST00000489406 ZNF623O75123 536 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 SEC24BO95487 1268 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 HNRNPA1P09651 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
UFD1-209ENST00000489406 MX1P20591 662 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 GRM2Q14416 872 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 PPM1LQ5SGD2 360 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 MIS18BP1Q6P0N0 1132 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 CACNA2D4Q7Z3S7 1137 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 WDR5BQ86VZ2 330 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 MBOAT7Q96N66 472 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 KRT23Q9C075 422 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 CHMP4BQ9H444 224 aaKnown RBP17.03■□□□□ 0.32
UFD1-209ENST00000489406 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.03■□□□□ 0.32
UFD1-209ENST00000489406 HCFC1R1Q9NWW0 138 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 C2orf42Q9NWW7 574 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 FNIP2Q9P278 1114 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 KANSL3Q9P2N6 904 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
UFD1-209ENST00000489406 FREM2Q5SZK8 3169 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 PAPSS2O95340 614 aaPredicted RBP17.02■□□□□ 0.32
UFD1-209ENST00000489406 RAB27AP51159 221 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 TROAPQ12815 778 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 LIN9Q5TKA1 542 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 LURAP1LQ8IV03 231 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 GCOM2Q9BZD3 368 aaPredicted RBP17.02■□□□□ 0.32
UFD1-209ENST00000489406 RSAD1Q9HA92 442 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 RBM12Q9NTZ6 932 aaKnown RBP17.02■□□□□ 0.32
UFD1-209ENST00000489406 FBXW11Q9UKB1 542 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 PCDHGA5Q9Y5G8 931 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 PIAS3Q9Y6X2 628 aa17.02■□□□□ 0.32
UFD1-209ENST00000489406 XYLBO75191 536 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 RPP40O75818 363 aaKnown RBP17.01■□□□□ 0.31
UFD1-209ENST00000489406 C8AP07357 584 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 PTGDRQ13258 359 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 Q6ZS52 159 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 CYB5R4Q7L1T6 521 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 GAB3Q8WWW8 586 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
UFD1-209ENST00000489406 LY9Q9HBG7 655 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 CACNA2D2Q9NY47 1150 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 MRPS23Q9Y3D9 190 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms