RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ADAT2Q7Z6V5 191 aaKnown RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 ANKRD18AQ8IVF6 992 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 PRR18Q8N4B5 295 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 MYCT1Q8N699 235 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 NAT16Q8N8M0 369 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TMEM52Q8NDY8 209 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 NSUN6Q8TEA1 469 aaKnown RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TMEM169Q96HH4 297 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TBCBQ99426 244 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 RETREG1Q9H6L5 497 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 NOL6Q9H6R4 1146 aaKnown RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 ARFGAP3Q9NP61 516 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 ZNF277Q9NRM2 450 aaPredicted RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TOPORSQ9NS56 1045 aaPredicted RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TBC1D22BQ9NU19 505 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 OXSMQ9NWU1 459 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 GPRC5BQ9NZH0 403 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 H2AFY2Q9P0M6 372 aaPredicted RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 ZNF652Q9Y2D9 606 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TMEM98Q9Y2Y6 226 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 COQ6Q9Y2Z9 468 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TMX2Q9Y320 296 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 CTDP1Q9Y5B0 961 aaPredicted RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 PCDHA8Q9Y5H6 950 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 A0A087WV62 115 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 PTPDC1A2A3K4 754 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 AREL1O15033 823 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 FGF10O15520 208 aaPredicted RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 B3GALT2O43825 422 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 BAIAP3O94812 1187 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 MBD4O95243 580 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 KCNH1O95259 989 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 CD4P01730 458 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 SNRPB2P08579 225 aaKnown RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 ATF2P15336 505 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 VEGFAP15692 232 aaPredicted RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 PIK3CBP42338 1070 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 PRIM2P49643 509 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 AGFG1P52594 562 aaKnown RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 CORO7P57737 925 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 POU4F1Q01851 419 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 MVKQ03426 396 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 KIAA0753Q2KHM9 967 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 SPATA1Q5VX52 437 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 ARMC3Q5W041 872 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 CWF19L1Q69YN2 538 aaKnown RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 RCSD1Q6JBY9 416 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 DARS2Q6PI48 645 aaKnown RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 CYP2R1Q6VVX0 501 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 USP53Q70EK8 1073 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 MTDHQ86UE4 582 aaKnown RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 GLCCI1Q86VQ1 547 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 PCDH19Q8TAB3 1148 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 PPP1R35Q8TAP8 253 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 ALG3Q92685 438 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 NELL1Q92832 810 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 RPGRQ92834 1020 aaKnown RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 KIAA1191Q96A73 305 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 ZBTB10Q96DT7 871 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 C1GALT1C1Q96EU7 318 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 DDX11Q96FC9 970 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 ZC3H10Q96K80 434 aaKnown RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 UBXN10Q96LJ8 280 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 FCRL3Q96P31 734 aaPredicted RBP4.03□□□□□ -1.76
PRPF4-203ENST00000488937 JMJD8Q96S16 334 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 MCMBPQ9BTE3 642 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 TTLL2Q9BWV7 592 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 PCDH18Q9HCL0 1135 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 AP5S1Q9NUS5 200 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 ST6GALNAC2Q9UJ37 374 aa4.03□□□□□ -1.76
PRPF4-203ENST00000488937 AURKAO14965 403 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 MAFKO60675 156 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 UBXN7O94888 489 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 DDX58O95786 925 aaKnown RBP4.02□□□□□ -1.77
PRPF4-203ENST00000488937 APPP05067 770 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 PYGLP06737 847 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 ABCB4P21439 1286 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 AGXTP21549 392 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 C5AR1P21730 350 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 TNFSF4P23510 183 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 GRK2P25098 689 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 PEX2P28328 305 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 IL12RB1P42701 662 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 NOP2P46087 812 aaKnown RBP4.02□□□□□ -1.77
PRPF4-203ENST00000488937 MTNR1BP49286 362 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 CACNB3P54284 484 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 SCAND1P57086 179 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 SMAD3P84022 425 aaKnown RBP4.02□□□□□ -1.77
PRPF4-203ENST00000488937 PRR5P85299 388 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 SMAD2Q15796 467 aaKnown RBP4.02□□□□□ -1.77
PRPF4-203ENST00000488937 FAM26FQ5R3K3 315 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 VPS53Q5VIR6 699 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 IZUMO3Q5VZ72 239 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 SWSAP1Q6NVH7 229 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 USP45Q70EL2 814 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 PDZD4Q76G19 769 aaPredicted RBP4.02□□□□□ -1.77
PRPF4-203ENST00000488937 PLEKHH3Q7Z736 793 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 CREBRFQ8IUR6 639 aa4.02□□□□□ -1.77
PRPF4-203ENST00000488937 DENND1CQ8IV53 801 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms