RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 MPHOSPH6Q99547 160 aaKnown RBP19.88■□□□□ 0.77
COL16A1-215ENST00000488897 RNF208Q9H0X6 261 aa19.88■□□□□ 0.77
COL16A1-215ENST00000488897 GDF3Q9NR23 364 aa19.88■□□□□ 0.77
COL16A1-215ENST00000488897 PCDHGC5Q9Y5F6 944 aa19.88■□□□□ 0.77
COL16A1-215ENST00000488897 CETN3O15182 167 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 GNRH1P01148 92 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 MARK3P27448 753 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 KLHL30Q0D2K2 578 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 RAPGEF1Q13905 1077 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 ARHGEF6Q15052 776 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 CELF3Q5SZQ8 465 aaKnown RBP19.87■□□□□ 0.77
COL16A1-215ENST00000488897 SCFD1Q8WVM8 642 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 GNEQ9Y223 722 aaKnown RBP19.87■□□□□ 0.77
COL16A1-215ENST00000488897 C6orf222P0C671 652 aaPredicted RBP19.87■□□□□ 0.77
COL16A1-215ENST00000488897 CYP11B2P19099 503 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 KLRC1P26715 233 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 IRAK1P51617 712 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 MRPS25P82663 173 aaKnown RBP19.87■□□□□ 0.77
COL16A1-215ENST00000488897 ASIC2Q16515 512 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 C10orf76Q5T2E6 689 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 MEI1Q5TIA1 1274 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 TLK2Q86UE8 772 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 SLAIN1Q8ND83 568 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 MS4A14Q96JA4 679 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL16A1-215ENST00000488897 CAPS2Q9BXY5 557 aa19.87■□□□□ 0.77
COL16A1-215ENST00000488897 JPH1Q9HDC5 661 aaPredicted RBP19.87■□□□□ 0.77
COL16A1-215ENST00000488897 FRMD3A2A2Y4 597 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 KRT18P05783 430 aaKnown RBP19.86■□□□□ 0.77
COL16A1-215ENST00000488897 MAGEA9P43362 315 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 DUSP28Q4G0W2 176 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 MAP3K21Q5TCX8 1036 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 OR6J1Q8NGC5 347 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 FGFBP2Q9BYJ0 223 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 SLC9A2Q9UBY0 812 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 ICAM3P32942 547 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 CORO7P57737 925 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 ACTR2P61160 394 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 SETQ01105 290 aaPredicted RBP19.86■□□□□ 0.77
COL16A1-215ENST00000488897 APBA1Q02410 837 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 PAK2Q13177 524 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 KIAA0753Q2KHM9 967 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 XRRA1Q6P2D8 792 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 MOXD1Q6UVY6 613 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 SLFN12Q8IYM2 578 aa19.86■□□□□ 0.77
COL16A1-215ENST00000488897 TSEN2Q8NCE0 465 aaKnown RBP19.86■□□□□ 0.77
COL16A1-215ENST00000488897 GSTTP1A0A1W2PQM5 241 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 POTEB3A0JP26 581 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 BTNL10A8MVZ5 291 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 CCL5P13501 91 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 KCNH2Q12809 1159 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 SWSAP1Q6NVH7 229 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 POTEBQ6S5H4 581 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 TEKT3Q9BXF9 490 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 FAM107BQ9H098 131 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 GANQ9H2C0 597 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 HMX1Q9NP08 348 aaPredicted RBP19.85■□□□□ 0.77
COL16A1-215ENST00000488897 A0A087X0T9 212 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 SEPT4O43236 478 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 MED24O75448 989 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 FAM228BP0C875 321 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 TCF7P36402 384 aaPredicted RBP19.85■□□□□ 0.77
COL16A1-215ENST00000488897 PSMC6P62333 389 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 FBXO46Q6PJ61 603 aaPredicted RBP19.85■□□□□ 0.77
COL16A1-215ENST00000488897 CCDC60Q8IWA6 550 aaPredicted RBP19.85■□□□□ 0.77
COL16A1-215ENST00000488897 DYDC2Q96IM9 177 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 ADAMTS1Q9UHI8 967 aa19.85■□□□□ 0.77
COL16A1-215ENST00000488897 BZW2Q9Y6E2 419 aaKnown RBP19.85■□□□□ 0.77
COL16A1-215ENST00000488897 NPHP3-ACAD11A0A0J9YXS1 232 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 FTCDO95954 541 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 GLI1P08151 1106 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 AKR1A1P14550 325 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 LHX8Q68G74 356 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 IQSEC1Q6DN90 963 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 TPH2Q8IWU9 490 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 PCYT2Q99447 389 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 RBM47A0AV96 593 aaKnown RBP19.84■□□□□ 0.77
COL16A1-215ENST00000488897 CES2O00748 559 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 STAM2O75886 525 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 HEXIM1O94992 359 aaKnown RBP19.84■□□□□ 0.77
COL16A1-215ENST00000488897 SLC12A3P55017 1021 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 ARID5AQ03989 594 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 FRMD5Q7Z6J6 570 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 PIGOQ8TEQ8 1089 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 GPR20Q99678 358 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 EPB41L5Q9HCM4 733 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 XPNPEP3Q9NQH7 507 aa19.84■□□□□ 0.77
COL16A1-215ENST00000488897 NOP56O00567 594 aaKnown RBP19.83■□□□□ 0.77
COL16A1-215ENST00000488897 SKOR1P84550 965 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 CACNB1Q02641 598 aaPredicted RBP19.83■□□□□ 0.77
COL16A1-215ENST00000488897 GNASQ5JWF2 1037 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 NIPA1Q7RTP0 329 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 MIER3Q7Z3K6 550 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 FAM20AQ96MK3 541 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL16A1-215ENST00000488897 PLEKHA4Q9H4M7 779 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 PLCB1Q9NQ66 1216 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 GABBR1Q9UBS5 961 aa19.83■□□□□ 0.77
COL16A1-215ENST00000488897 RANBP2P49792 3224 aaKnown RBP19.83■□□□□ 0.76
COL16A1-215ENST00000488897 NR2F2P24468 414 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms