RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 NR1I2O75469 434 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 NPTXRO95502 500 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 ATF7P17544 494 aaPredicted RBP14.18□□□□□ -0.14
PHF1-210ENST00000488767 AMPD3Q01432 767 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
PHF1-210ENST00000488767 CCDC85BQ15834 202 aaPredicted RBP14.18□□□□□ -0.14
PHF1-210ENST00000488767 UBXN11Q5T124 520 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 ATF7IP2Q5U623 682 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 USP49Q70CQ1 688 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 DAW1Q8N136 415 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 PDILTQ8N807 584 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 IQUBQ8NA54 791 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 COLGALT1Q8NBJ5 622 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 SPATA32Q96LK8 384 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 REEP2Q9BRK0 252 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 NTPCRQ9BSD7 190 aaKnown RBP14.18□□□□□ -0.14
PHF1-210ENST00000488767 APOL6Q9BWW8 343 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 EIF2AQ9BY44 585 aaKnown RBP14.18□□□□□ -0.14
PHF1-210ENST00000488767 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
PHF1-210ENST00000488767 CCDC113Q9H0I3 377 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 CUEDC2Q9H467 287 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 ARHGAP28Q9P2N2 729 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 GIT1Q9Y2X7 761 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 ZDHHC9Q9Y397 364 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 RALGAPA2Q2PPJ7 1873 aa14.18□□□□□ -0.14
PHF1-210ENST00000488767 NPHP3-ACAD11A0A0J9YXS1 232 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 SFI1A8K8P3 1242 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 SLC16A4O15374 487 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 OFD1O75665 1012 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
PHF1-210ENST00000488767 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
PHF1-210ENST00000488767 UBE3AQ05086 875 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 ARSHQ5FYA8 562 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 KLHL23Q8NBE8 558 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 KCNN1Q92952 543 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 BICD1Q96G01 975 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 RPS6KC1Q96S38 1066 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 TCHPQ9BT92 498 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 PANK2Q9BZ23 570 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 PDZD7Q9H5P4 517 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 STK39Q9UEW8 545 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 PARP2Q9UGN5 583 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 RCOR1Q9UKL0 485 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 PLAGL2Q9UPG8 496 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 CHD7Q9P2D1 2997 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 MYH15Q9Y2K3 1946 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 TRANK1O15050 2925 aa14.17□□□□□ -0.14
PHF1-210ENST00000488767 K7ENM7 598 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 LPXNO60711 386 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 ZC3H11AO75152 810 aaKnown RBP eCLIP14.16□□□□□ -0.14
PHF1-210ENST00000488767 MAPK7Q13164 816 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 GIT2Q14161 759 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 ZNF568Q3ZCX4 644 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 KCNT2Q6UVM3 1135 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 AGMOQ6ZNB7 445 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 CDR2LQ86X02 465 aaPredicted RBP14.16□□□□□ -0.14
PHF1-210ENST00000488767 FAM178BQ8IXR5 827 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 SMG8Q8ND04 991 aaKnown RBP14.16□□□□□ -0.14
PHF1-210ENST00000488767 GBP3Q9H0R5 595 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 TNMDQ9H2S6 317 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 NXF3Q9H4D5 531 aaKnown RBP14.16□□□□□ -0.14
PHF1-210ENST00000488767 NSUN3Q9H649 340 aaKnown RBP14.16□□□□□ -0.14
PHF1-210ENST00000488767 CWH43Q9H720 699 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 MAGEF1Q9HAY2 307 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 ALG13Q9NP73 1137 aaKnown RBP14.16□□□□□ -0.14
PHF1-210ENST00000488767 RNF19AQ9NV58 838 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 TBC1D13Q9NVG8 400 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 SPG21Q9NZD8 308 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 SEL1LQ9UBV2 794 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 TNFSF13BQ9Y275 285 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 ZMYM2Q9UBW7 1377 aa14.16□□□□□ -0.14
PHF1-210ENST00000488767 COL4A4P53420 1690 aaPredicted RBP14.15□□□□□ -0.14
PHF1-210ENST00000488767 ARL5CA6NH57 179 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 TRAK2O60296 914 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 FGF18O76093 207 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 MAPTP10636 758 aaKnown RBP14.15□□□□□ -0.14
PHF1-210ENST00000488767 IDEP14735 1019 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 GAP43P17677 238 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 MLH1P40692 756 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 MATR3P43243 847 aaKnown RBP eCLIP14.15□□□□□ -0.14
PHF1-210ENST00000488767 YARSP54577 528 aaKnown RBP14.15□□□□□ -0.14
PHF1-210ENST00000488767 NCKAP1LP55160 1127 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 PDE12Q6L8Q7 609 aaKnown RBP14.15□□□□□ -0.14
PHF1-210ENST00000488767 DYMQ7RTS9 669 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 HAUS6Q7Z4H7 955 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 TMEM161BQ8NDZ6 487 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 MICAL1Q8TDZ2 1067 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 POF1BQ8WVV4 589 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 DDX12PQ92771 950 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 DHX58Q96C10 678 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 TMEM169Q96HH4 297 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 CCDC94Q9BW85 323 aaPredicted RBP14.15□□□□□ -0.14
PHF1-210ENST00000488767 TOPORSQ9NS56 1045 aaPredicted RBP14.15□□□□□ -0.14
PHF1-210ENST00000488767 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
PHF1-210ENST00000488767 PCDHA7Q9UN72 937 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 LZTS1Q9Y250 596 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 HES2Q9Y543 173 aa14.15□□□□□ -0.14
PHF1-210ENST00000488767 FSD2A1L4K1 749 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms