RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TMED2Q15363 201 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 IRF2BP2Q7Z5L9 587 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 DDX12PQ92771 950 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 MCUR1Q96AQ8 359 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 C9orf72Q96LT7 481 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 A0A0G2JND7 137 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 AMPD1P23109 780 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 PTENP60484 403 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 KCNH2Q12809 1159 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 MTFR1Q15390 333 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 DUS1LQ6P1R4 473 aaKnown RBP17.31■□□□□ 0.36
MCF2L-229ENST00000488765 CCDC137Q6PK04 289 aaKnown RBP17.31■□□□□ 0.36
MCF2L-229ENST00000488765 SDCCAG8Q86SQ7 713 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-229ENST00000488765 JDP2Q8WYK2 163 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 GATA6Q92908 595 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 CCDC134Q9H6E4 229 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 MAPK13O15264 365 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-229ENST00000488765 SPATA24Q86W54 205 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
MCF2L-229ENST00000488765 DHX36Q9H2U1 1008 aaKnown RBP17.3■□□□□ 0.36
MCF2L-229ENST00000488765 KRT82Q9NSB4 513 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.3■□□□□ 0.36
MCF2L-229ENST00000488765 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 MYH4Q9Y623 1939 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 BOLA2-SMG1P6H3BVE0 249 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 O00370 1275 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 BTKQ06187 659 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 MTM1Q13496 603 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 EIF1ADQ8N9N8 165 aaKnown RBP17.3■□□□□ 0.36
MCF2L-229ENST00000488765 CLPTM1LQ96KA5 538 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 TSG101Q99816 390 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 ZFP69BQ9UJL9 534 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 SERPINA10Q9UK55 444 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 TXNDC9O14530 226 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 WDR4P57081 412 aaKnown RBP17.3■□□□□ 0.36
MCF2L-229ENST00000488765 ANKRD23Q86SG2 305 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 C1orf54Q8WWF1 131 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-229ENST00000488765 TAS2R14Q9NYV8 317 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
MCF2L-229ENST00000488765 RASA4BC9J798 803 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 RASA4O43374 803 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 WFS1O76024 890 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 LIN52Q52LA3 116 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 ARHGEF26Q96DR7 871 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 PLA2G12BQ9BX93 195 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 UBA5Q9GZZ9 404 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 PCDHA6Q9UN73 950 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 PCDHA8Q9Y5H6 950 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 ZBED4O75132 1171 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 BAG3O95817 575 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 GSTA2P09210 222 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 ZBTB48P10074 688 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-229ENST00000488765 AMPD3Q01432 767 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 CBX3Q13185 183 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 ZCWPW2Q504Y3 356 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 CALML4Q96GE6 196 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 STMN4Q9H169 189 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-229ENST00000488765 HSFX1Q9UBD0 423 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 FLT1P17948 1338 aa17.29■□□□□ 0.36
MCF2L-229ENST00000488765 GSTTP1A0A1W2PQM5 241 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 USP17L12C9JPN9 530 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 USP17L21D6R901 530 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 DDX3XO00571 662 aaKnown RBP eCLIP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 GYG2O15488 501 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 EXOC3O60645 756 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 UCHL3P15374 230 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 CHRNB2P17787 502 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 EIF4BP23588 611 aaKnown RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 PARP6Q2NL67 630 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 ENDOVQ8N8Q3 282 aaKnown RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 SEC14L1Q92503 715 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 SETDB2Q96T68 719 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 MMTAG2Q9BU76 263 aaKnown RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 FBXO6Q9NRD1 293 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 ARMCX1Q9P291 453 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 HEMK1Q9Y5R4 338 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 POC1B-GALNT4F8VUJ3 575 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 RNASEH1O60930 286 aaKnown RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 CYP2D6P10635 497 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 PSMC4P43686 418 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 SLC34A1Q06495 639 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 PFKFB3Q16875 520 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 RNF43Q68DV7 783 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 PRELID2Q8N945 189 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 C7orf25Q9BPX7 421 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 IKZF4Q9H2S9 585 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 ASIC3Q9UHC3 531 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 THAP12O43422 761 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 FKBP3Q00688 224 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms