RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FNDC1Q4ZHG4 1894 aaPredicted RBP16.58■□□□□ 0.24
CXCL12-207ENST00000488591 NLRC5Q86WI3 1866 aa16.58■□□□□ 0.24
CXCL12-207ENST00000488591 C5orf67F2Z3F1 127 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 NPTXRO95502 500 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 LAG3P18627 525 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 POU3F3P20264 500 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-207ENST00000488591 ADGRE1Q14246 886 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 PTPROQ16827 1216 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 URGCPQ8TCY9 931 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 GDPD5Q8WTR4 605 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-207ENST00000488591 PYM1Q9BRP8 204 aaKnown RBP16.57■□□□□ 0.24
CXCL12-207ENST00000488591 RSAD1Q9HA92 442 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 RNF19AQ9NV58 838 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 ARHGAP28Q9P2N2 729 aa16.57■□□□□ 0.24
CXCL12-207ENST00000488591 OFD1O75665 1012 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 LINC00271P0C7V0 271 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 ABCD1P33897 745 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 AMPD3Q01432 767 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 RNASELQ05823 741 aaKnown RBP16.56■□□□□ 0.24
CXCL12-207ENST00000488591 NOMO2Q5JPE7 1267 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 ATF7IP2Q5U623 682 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 DYMQ7RTS9 669 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 CDR2LQ86X02 465 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-207ENST00000488591 SMG8Q8ND04 991 aaKnown RBP16.56■□□□□ 0.24
CXCL12-207ENST00000488591 SLC17A8Q8NDX2 589 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 MAFAQ8NHW3 353 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-207ENST00000488591 DDX12PQ92771 950 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 P2RX5Q93086 422 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
CXCL12-207ENST00000488591 PDZD7Q9H5P4 517 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 KANSL3Q9P2N6 904 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 INPP5FQ9Y2H2 1132 aa16.56■□□□□ 0.24
CXCL12-207ENST00000488591 A0A087X0B3 334 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 CARNS1A5YM72 827 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 TRAK2O60296 914 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 LPXNO60711 386 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 ZNF131P52739 623 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 DCAF4L1Q3SXM0 396 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 RESP18Q5W5W9 173 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 ADALQ6DHV7 355 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 AGMOQ6ZNB7 445 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 LRRC55Q6ZSA7 311 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 HAUS6Q7Z4H7 955 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 TMEM161BQ8NDZ6 487 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 DHX58Q96C10 678 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 FAM193BQ96PV7 902 aaPredicted RBP16.55■□□□□ 0.24
CXCL12-207ENST00000488591 APOL6Q9BWW8 343 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 CWH43Q9H720 699 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 PARP2Q9UGN5 583 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 TNFSF13BQ9Y275 285 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 GIT1Q9Y2X7 761 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 HES2Q9Y543 173 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
CXCL12-207ENST00000488591 MYMKA6NI61 221 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 TTLL13PA6NNM8 815 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 MEIS3P2A8K0S8 358 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 K7ENM7 598 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 POLR2DO15514 142 aaKnown RBP16.54■□□□□ 0.24
CXCL12-207ENST00000488591 MAPTP10636 758 aaKnown RBP16.54■□□□□ 0.24
CXCL12-207ENST00000488591 GAP43P17677 238 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 NCKAP1LP55160 1127 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 NT5DC1Q5TFE4 455 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 FAM178BQ8IXR5 827 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 THNSL1Q8IYQ7 743 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 KLHL23Q8NBE8 558 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 COLGALT1Q8NBJ5 622 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 ZNF558Q96NG5 402 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 ACO2Q99798 780 aaKnown RBP16.54■□□□□ 0.24
CXCL12-207ENST00000488591 TCHPQ9BT92 498 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 LMAN2LQ9H0V9 348 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 TNMDQ9H2S6 317 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 MAGEF1Q9HAY2 307 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
CXCL12-207ENST00000488591 IDEP14735 1019 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 CMA1P23946 247 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 PPM1AP35813 382 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 ALDH7A1P49419 539 aaKnown RBP16.53■□□□□ 0.24
CXCL12-207ENST00000488591 E2F4Q16254 413 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 KCNT2Q6UVM3 1135 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 PPM1EQ8WY54 764 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 MRPL38Q96DV4 380 aaKnown RBP16.53■□□□□ 0.24
CXCL12-207ENST00000488591 BICD1Q96G01 975 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 TARS2Q9BW92 718 aaKnown RBP16.53■□□□□ 0.24
CXCL12-207ENST00000488591 NXF3Q9H4D5 531 aaKnown RBP16.53■□□□□ 0.24
CXCL12-207ENST00000488591 TBC1D13Q9NVG8 400 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
CXCL12-207ENST00000488591 PLAGL2Q9UPG8 496 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
CXCL12-207ENST00000488591 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
CXCL12-207ENST00000488591 KIAA1671Q9BY89 1806 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 ARL5CA6NH57 179 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 EDN1P05305 212 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 AKAP5P24588 427 aa16.52■□□□□ 0.24
CXCL12-207ENST00000488591 KRT17Q04695 432 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms