RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 PTGDRQ13258 359 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 ANKRD54Q6NXT1 300 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 SLC27A1Q6PCB7 646 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 ZBTB8OSQ8IWT0 167 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 BCL7CQ8WUZ0 217 aaPredicted RBP25.59■■□□□ 1.69
CUL4A-209ENST00000488558 CASP10Q92851 521 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 FAM193BQ96PV7 902 aaPredicted RBP25.59■■□□□ 1.69
CUL4A-209ENST00000488558 TRIM6Q9C030 488 aaPredicted RBP25.59■■□□□ 1.69
CUL4A-209ENST00000488558 GBP3Q9H0R5 595 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 C2orf40Q9H1Z8 148 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 C11orf16Q9NQ32 467 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 PCDHB6Q9Y5E3 794 aa25.59■■□□□ 1.69
CUL4A-209ENST00000488558 C5orf42Q9H799 3197 aa25.58■■□□□ 1.69
CUL4A-209ENST00000488558 A0A1B0GUA9 196 aa25.58■■□□□ 1.69
CUL4A-209ENST00000488558 DDHD2O94830 711 aa25.58■■□□□ 1.69
CUL4A-209ENST00000488558 AFF1P51825 1210 aaKnown RBP25.58■■□□□ 1.69
CUL4A-209ENST00000488558 FAM187BQ17R55 369 aa25.58■■□□□ 1.69
CUL4A-209ENST00000488558 TBC1D32Q96NH3 1257 aa25.58■■□□□ 1.69
CUL4A-209ENST00000488558 LRFN3Q9BTN0 628 aa25.58■■□□□ 1.69
CUL4A-209ENST00000488558 DAXXQ9UER7 740 aaPredicted RBP25.58■■□□□ 1.69
CUL4A-209ENST00000488558 GIT1Q9Y2X7 761 aa25.58■■□□□ 1.69
CUL4A-209ENST00000488558 ARL5CA6NH57 179 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 B4GALT5O43286 388 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 CD2BP2O95400 341 aaKnown RBP25.57■■□□□ 1.68
CUL4A-209ENST00000488558 NAMPTP43490 491 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 RILPL1Q5EBL4 403 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 MAEAQ7L5Y9 396 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 S1PR5Q9H228 398 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 FZD8Q9H461 694 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.57■■□□□ 1.68
CUL4A-209ENST00000488558 HCFC2Q9Y5Z7 792 aa25.57■■□□□ 1.68
CUL4A-209ENST00000488558 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.56■■□□□ 1.68
CUL4A-209ENST00000488558 CLASP2O75122 1294 aaKnown RBP25.56■■□□□ 1.68
CUL4A-209ENST00000488558 CXCL14O95715 111 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 POMCP01189 267 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 ALDH2P05091 517 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 MLH1P40692 756 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 DSC1Q08554 894 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 PPP2R5AQ15172 486 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 LLGL2Q6P1M3 1020 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 SYCE2Q6PIF2 218 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 SNX29Q8TEQ0 813 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 GAD1Q99259 594 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 PHF7Q9BWX1 381 aaPredicted RBP25.56■■□□□ 1.68
CUL4A-209ENST00000488558 VN1R3Q9BXE9 311 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 RNF39Q9H2S5 420 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 NXF3Q9H4D5 531 aaKnown RBP25.56■■□□□ 1.68
CUL4A-209ENST00000488558 FAN1Q9Y2M0 1017 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 HES2Q9Y543 173 aa25.56■■□□□ 1.68
CUL4A-209ENST00000488558 LOC730098B7Z3J9 87 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 GJB2P29033 226 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 CBX2Q14781 532 aaPredicted RBP25.55■■□□□ 1.68
CUL4A-209ENST00000488558 ECM1Q16610 540 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 TPRNQ4KMQ1 711 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 COLGALT2Q8IYK4 626 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 BSNDQ8WZ55 320 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 BHMT2Q9H2M3 363 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 KIAA1024Q9UPX6 916 aa25.55■■□□□ 1.68
CUL4A-209ENST00000488558 NRP1O14786 923 aa25.54■■□□□ 1.68
CUL4A-209ENST00000488558 PTPN14Q15678 1187 aa25.54■■□□□ 1.68
CUL4A-209ENST00000488558 HERC4Q5GLZ8 1057 aaPredicted RBP25.54■■□□□ 1.68
CUL4A-209ENST00000488558 KIFAP3Q92845 792 aa25.54■■□□□ 1.68
CUL4A-209ENST00000488558 CCDC113Q9H0I3 377 aa25.54■■□□□ 1.68
CUL4A-209ENST00000488558 DZANK1Q9NVP4 752 aa25.54■■□□□ 1.68
CUL4A-209ENST00000488558 PRR33A8MZF0 331 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 N4BP3O15049 544 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 NPTXRO95502 500 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 CA8P35219 290 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 SCNN1GP51170 649 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 MAPK6Q16659 721 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 KRT79Q5XKE5 535 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 MCTP1Q6DN14 999 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 DTHD1Q6ZMT9 781 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 RNF135Q8IUD6 432 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 DEPTORQ8TB45 409 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 ZFP42Q96MM3 310 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 DDX19AQ9NUU7 478 aaKnown RBP25.53■■□□□ 1.68
CUL4A-209ENST00000488558 MARCH5Q9NX47 278 aa25.53■■□□□ 1.68
CUL4A-209ENST00000488558 H3BQV1 296 aa25.52■■□□□ 1.68
CUL4A-209ENST00000488558 ATP2C1P98194 919 aaPredicted RBP25.52■■□□□ 1.68
CUL4A-209ENST00000488558 ITIH3Q06033 890 aa25.52■■□□□ 1.68
CUL4A-209ENST00000488558 PPFIBP1Q86W92 1011 aa25.52■■□□□ 1.68
CUL4A-209ENST00000488558 TMEM87AQ8NBN3 555 aa25.52■■□□□ 1.68
CUL4A-209ENST00000488558 AUTS2Q8WXX7 1259 aa25.52■■□□□ 1.68
CUL4A-209ENST00000488558 IFT74Q96LB3 600 aa25.52■■□□□ 1.68
CUL4A-209ENST00000488558 APOL6Q9BWW8 343 aa25.52■■□□□ 1.68
CUL4A-209ENST00000488558 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.52■■□□□ 1.68
CUL4A-209ENST00000488558 FAM86C2PA6NEL3 165 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 ACKR2O00590 384 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 NR1I2O75469 434 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 EFEMP2O95967 443 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 SOD2P04179 222 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 PRKCBP05771 671 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 EFNA5P52803 228 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 GRIK3Q13003 919 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 PRPF4BQ13523 1007 aaKnown RBP25.51■■□□□ 1.67
CUL4A-209ENST00000488558 IL17AQ16552 155 aa25.51■■□□□ 1.67
CUL4A-209ENST00000488558 CDR2LQ86X02 465 aaPredicted RBP25.51■■□□□ 1.67
CUL4A-209ENST00000488558 RNF168Q8IYW5 571 aaPredicted RBP25.51■■□□□ 1.67
CUL4A-209ENST00000488558 KCTD17Q8N5Z5 321 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms