RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 NOTUMQ6P988 496 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 TMC5Q6UXY8 1006 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 IFNLR1Q8IU57 520 aaPredicted RBP17.04■□□□□ 0.32
TRIM50-203ENST00000488217 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
TRIM50-203ENST00000488217 ZDHHC14Q8IZN3 488 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
TRIM50-203ENST00000488217 PRSS33Q8NF86 280 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 CCDC51Q96ER9 411 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 GAD1Q99259 594 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 EIF2AQ9BY44 585 aaKnown RBP17.04■□□□□ 0.32
TRIM50-203ENST00000488217 CSRNP2Q9H175 543 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 MIOSQ9NXC5 875 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 SORCS3Q9UPU3 1222 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 USTQ9Y2C2 406 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 SSX2IPQ9Y2D8 614 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 ATG2AQ2TAZ0 1938 aa17.04■□□□□ 0.32
TRIM50-203ENST00000488217 KIAA1671Q9BY89 1806 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
TRIM50-203ENST00000488217 LARGE1O95461 756 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 PTPN5P54829 565 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 KIAA1841Q6NSI8 718 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 TAS1R1Q7RTX1 841 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 GPR149Q86SP6 731 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 COLGALT2Q8IYK4 626 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 PIGOQ8TEQ8 1089 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 CPB2Q96IY4 423 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 NFKBIZQ9BYH8 718 aa17.03■□□□□ 0.32
TRIM50-203ENST00000488217 INPPL1O15357 1258 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 NEMFO60524 1076 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 JAK2O60674 1132 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 NR1I2O75469 434 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 SOD2P04179 222 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 GLRA2P23416 452 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 OR1G1P47890 313 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 RARRES1P49788 294 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 CLCN4P51793 760 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 MBTD1Q05BQ5 628 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 MTMR3Q13615 1198 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 ASAP3Q8TDY4 903 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 RPS6KC1Q96S38 1066 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 COLEC11Q9BWP8 271 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 HES2Q9Y543 173 aa17.02■□□□□ 0.32
TRIM50-203ENST00000488217 TECTAO75443 2155 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 A0A1B0GUA9 196 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 WNT7AO00755 349 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 C2CD2LO14523 706 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 BRD1O95696 1058 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 ARF4P18085 180 aaPredicted RBP17.01■□□□□ 0.31
TRIM50-203ENST00000488217 VCPP55072 806 aaKnown RBP17.01■□□□□ 0.31
TRIM50-203ENST00000488217 TCF15Q12870 199 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 CAPSQ13938 189 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 AMHR2Q16671 573 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 KIAA0319Q5VV43 1072 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 HACE1Q8IYU2 909 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 TDRD5Q8NAT2 981 aaKnown RBP17.01■□□□□ 0.31
TRIM50-203ENST00000488217 CCDC43Q96MW1 224 aaKnown RBP17.01■□□□□ 0.31
TRIM50-203ENST00000488217 TRIM6Q9C030 488 aaPredicted RBP17.01■□□□□ 0.31
TRIM50-203ENST00000488217 SFXN1Q9H9B4 322 aa17.01■□□□□ 0.31
TRIM50-203ENST00000488217 PRG3Q9Y2Y8 225 aaPredicted RBP17.01■□□□□ 0.31
TRIM50-203ENST00000488217 SPDYE4A6NLX3 237 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 EFEMP2O95967 443 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 PDGFBP01127 241 aaPredicted RBP17■□□□□ 0.31
TRIM50-203ENST00000488217 ASGR2P07307 311 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 SPATA31C1P0DKV0 1188 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 ATP2B1P20020 1258 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 MLH1P40692 756 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 FOSBP53539 338 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 DSC1Q08554 894 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
TRIM50-203ENST00000488217 MAEAQ7L5Y9 396 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 OTOP3Q7RTS5 596 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 CATSPER3Q86XQ3 398 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 FEZF2Q8TBJ5 459 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 ACSF2Q96CM8 615 aaPredicted RBP17■□□□□ 0.31
TRIM50-203ENST00000488217 ZFP42Q96MM3 310 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 NACC1Q96RE7 527 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 APOL6Q9BWW8 343 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 IRF2BPLQ9H1B7 796 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 TMEM60Q9H2L4 133 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 RXFP1Q9HBX9 757 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 MARCH5Q9NX47 278 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 DPP7Q9UHL4 492 aa17■□□□□ 0.31
TRIM50-203ENST00000488217 TEX28O15482 410 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 URODP06132 367 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 AKAP5P24588 427 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 MCM7P33993 719 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 SCNN1GP51170 649 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 NUBP1P53384 320 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 ERICH6BQ5W0A0 696 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 C15orf39Q6ZRI6 1047 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 GSTCDQ8NEC7 633 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 PHOX2BQ99453 314 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 HERC2P3Q9BVR0 1158 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 POLR3FQ9H1D9 316 aaPredicted RBP16.99■□□□□ 0.31
TRIM50-203ENST00000488217 TUFT1Q9NNX1 390 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 CHST7Q9NS84 486 aa16.99■□□□□ 0.31
TRIM50-203ENST00000488217 PIEZO1Q92508 2521 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 CCDC195A0A1B0GUA6 201 aa16.98■□□□□ 0.31
TRIM50-203ENST00000488217 B4GALT5O43286 388 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms