RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 ZBTB48P10074 688 aaPredicted RBP4.32□□□□□ -1.72
HFM1-208ENST00000488023 PDE6AP16499 860 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 AGXTP21549 392 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 FPR2P25090 351 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 PTX3P26022 381 aaPredicted RBP4.32□□□□□ -1.72
HFM1-208ENST00000488023 PEX2P28328 305 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 LSP1P33241 339 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 CCT5P48643 541 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 FAM193AP78312 1265 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 PHC1P78364 1004 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 KIF23Q02241 960 aaPredicted RBP4.32□□□□□ -1.72
HFM1-208ENST00000488023 SMAD4Q13485 552 aaKnown RBP4.32□□□□□ -1.72
HFM1-208ENST00000488023 KIZQ2M2Z5 673 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 UAP1L1Q3KQV9 507 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 TOR2AQ5JU69 321 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 C16orf59Q7L2K0 433 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 OTOP3Q7RTS5 596 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 SPRED1Q7Z699 444 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 OSTM1Q86WC4 334 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 OR2C3Q8N628 320 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 PPM1NQ8N819 430 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 LINC00482Q8N8I6 264 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 KIAA1958Q8N8K9 716 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 KIAA1191Q96A73 305 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 ORAI2Q96SN7 254 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 SSBP3Q9BWW4 388 aaPredicted RBP4.32□□□□□ -1.72
HFM1-208ENST00000488023 PCED1AQ9H1Q7 454 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 VPS11Q9H270 941 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 TMEM60Q9H2L4 133 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 RRN3Q9NYV6 651 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 SLC4A7Q9Y6M7 1214 aa4.32□□□□□ -1.72
HFM1-208ENST00000488023 NCK2O43639 380 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 B3GALT2O43825 422 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 SNX2O60749 519 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 NDUFS2O75306 463 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 UBXN7O94888 489 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 ALDH2P05091 517 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 C8BP07358 591 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 KRT15P19012 456 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 PDCP20941 246 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 PTMSP20962 102 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 ADKP55263 362 aaKnown RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 JAM2P57087 298 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 IRF9Q00978 393 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 ALDH6A1Q02252 535 aaKnown RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 KIAA2012Q0VF49 1180 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 DDX10Q13206 875 aaKnown RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 IFIT5Q13325 482 aaKnown RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 ARHGAP44Q17R89 818 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 HYIQ5T013 277 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 PPP4R3AQ6IN85 833 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 SWSAP1Q6NVH7 229 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 MZT2AQ6P582 158 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 DARS2Q6PI48 645 aaKnown RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 NPNTQ6UXI9 565 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 ZC3H18Q86VM9 953 aaKnown RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 FAM126BQ8IXS8 530 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 ZNF610Q8N9Z0 462 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 SPATA5Q8NB90 893 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 SH3RF3Q8TEJ3 882 aaPredicted RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 MVB12AQ96EY5 273 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 DDX11Q96FC9 970 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 LRFN3Q9BTN0 628 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 BOCQ9BWV1 1114 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 QRSL1Q9H0R6 528 aaKnown RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 ZMAT4Q9H898 229 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 SMURF1Q9HCE7 757 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 ZNF277Q9NRM2 450 aaPredicted RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 EVLQ9UI08 416 aaPredicted RBP4.31□□□□□ -1.72
HFM1-208ENST00000488023 ST6GALNAC2Q9UJ37 374 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 HDAC9Q9UKV0 1011 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 L1RE1Q9UN81 338 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 EDARQ9UNE0 448 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 LRCH1Q9Y2L9 728 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 GPR45Q9Y5Y3 372 aa4.31□□□□□ -1.72
HFM1-208ENST00000488023 TCRBV5S4A2TA0A5A2 114 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 FAM47E-STBD1D6RA91 191 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 H3BML4 177 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 M0R3H8 397 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 TCERG1O14776 1098 aaKnown RBP4.3□□□□□ -1.72
HFM1-208ENST00000488023 KPNA5O15131 536 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 GSTA4O15217 222 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 PYGLP06737 847 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 CLEC2LP0C7M8 214 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 TNFSF4P23510 183 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 GRK3P35626 688 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 PPM1AP35813 382 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 GRK6P43250 576 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 MTNR1BP49286 362 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 PDCD2Q16342 344 aaPredicted RBP4.3□□□□□ -1.72
HFM1-208ENST00000488023 CRY1Q16526 586 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 RNF220Q5VTB9 566 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 ESRP1Q6NXG1 681 aaKnown RBP4.3□□□□□ -1.72
HFM1-208ENST00000488023 USP45Q70EL2 814 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 DENND1CQ8IV53 801 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 KIAA0319LQ8IZA0 1049 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 LGI4Q8N135 537 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 TTLL6Q8N841 843 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 IL17REQ8NFR9 667 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 RIN2Q8WYP3 895 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms