RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ANKRD40Q6AI12 368 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 NOTUMQ6P988 496 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 FILIP1Q7Z7B0 1213 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 ZBTB10Q96DT7 871 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 OSMRQ99650 979 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 TCHPQ9BT92 498 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 NFE2L3Q9Y4A8 694 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 SCN10AQ9Y5Y9 1956 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 LOXHD1Q8IVV2 1947 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 A0A1B0GUA9 196 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 TGFB1I1O43294 461 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 CHRNA1P02708 482 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 TPM3P06753 285 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 CLTBP09497 229 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 EPB41P11171 864 aaKnown RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 SKIP12755 728 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 CDK11BP21127 795 aaKnown RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 NR2F2P24468 414 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 EEF1GP26641 437 aaKnown RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 RFC2P35250 354 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 HOXD13P35453 343 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 PSMC2P35998 433 aaKnown RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 PPP2R3AQ06190 1150 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 MGAT3Q09327 533 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 TMEM62Q0P6H9 643 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 IQCB1Q15051 598 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 TRIM60Q495X7 471 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 COL13A1Q5TAT6 717 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 LRRC8DQ7L1W4 858 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 UBE2Q1Q7Z7E8 422 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 ZC3H3Q8IXZ2 948 aaKnown RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 XXYLT1Q8NBI6 393 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 APBB2Q92870 758 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 ACO2Q99798 780 aaKnown RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 HTATIP2Q9BUP3 242 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 TARS2Q9BW92 718 aaKnown RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 FTHL17Q9BXU8 183 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 HIPK3Q9H422 1215 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 AGPAT5Q9NUQ2 364 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
HDLBP-242ENST00000488013 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-242ENST00000488013 A0A0B4J269 797 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 EXTL3O43909 919 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 TSPAN1O60635 241 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 EXOC3O60645 756 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 MCF2P10911 925 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 ZSCAN20P17040 1043 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-242ENST00000488013 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDLBP-242ENST00000488013 STX17P56962 302 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 MCL1Q07820 350 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 KCNA1Q09470 495 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 FAAP100Q0VG06 881 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 PAK2Q13177 524 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 AMHR2Q16671 573 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 FBXO47Q5MNV8 452 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 ZNF618Q5T7W0 954 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 MPZL3Q6UWV2 235 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 TAS1R3Q7RTX0 852 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 FRMD5Q7Z6J6 570 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 DHX40Q8IX18 779 aaKnown RBP12.06□□□□□ -0.48
HDLBP-242ENST00000488013 AOPEPQ8N6M6 819 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 DIS3LQ8TF46 1054 aaKnown RBP12.06□□□□□ -0.48
HDLBP-242ENST00000488013 DHX38Q92620 1227 aaKnown RBP12.06□□□□□ -0.48
HDLBP-242ENST00000488013 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 SRRTQ9BXP5 876 aaKnown RBP12.06□□□□□ -0.48
HDLBP-242ENST00000488013 DMAC2Q9NW81 257 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 PRKAG2Q9UGJ0 569 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 ATP11BQ9Y2G3 1177 aa12.06□□□□□ -0.48
HDLBP-242ENST00000488013 ZNF233A6NK53 670 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 KIAA0355O15063 1070 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 STX10O60499 249 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 CTSHP09668 335 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 KRT13P13646 458 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 ARF4P18085 180 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 EN2P19622 333 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 PROZP22891 400 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 MRE11P49959 708 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 RAB27AP51159 221 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 PMS1P54277 932 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 MARSP56192 900 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 NOLC1Q14978 699 aaKnown RBP eCLIP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 NCAPHQ15003 741 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 SURF1Q15526 300 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 ZNF568Q3ZCX4 644 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 SLC27A1Q6PCB7 646 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 LRRC55Q6ZSA7 311 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 INTS8Q75QN2 995 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 LUZP1Q86V48 1076 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 GPD1LQ8N335 351 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 RNF214Q8ND24 703 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 PPP1R13LQ8WUF5 828 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 ANP32BQ92688 251 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 ABHD8Q96I13 439 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms