RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 PCBP1Q15365 356 aaKnown RBP eCLIP22.37■■□□□ 1.172e-6■■■■■ 34.8
PHF1-208ENST00000486845 PPP4R3AQ6IN85 833 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 OTUD6AQ7L8S5 288 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 FERMT3Q86UX7 667 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 C4orf19Q8IY42 314 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 COLGALT2Q8IYK4 626 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 DTWD2Q8NBA8 298 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 RNF149Q8NC42 400 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 SMG8Q8ND04 991 aaKnown RBP22.37■■□□□ 1.17
PHF1-208ENST00000486845 CCDC51Q96ER9 411 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 AIFM3Q96NN9 605 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 LXNQ9BS40 222 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 ZSWIM6Q9HCJ5 1215 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 WDR6Q9NNW5 1121 aaKnown RBP22.37■■□□□ 1.17
PHF1-208ENST00000486845 WRAP73Q9P2S5 460 aaPredicted RBP22.37■■□□□ 1.17
PHF1-208ENST00000486845 VPS13AQ96RL7 3174 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 GVINP1Q7Z2Y8 2422 aa22.37■■□□□ 1.17
PHF1-208ENST00000486845 CLUHO75153 1309 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 CCDC195A0A1B0GUA6 201 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 INPPL1O15357 1258 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 TEX28O15482 410 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 AXLP30530 894 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 YWHABP31946 246 aaKnown RBP22.36■■□□□ 1.17
PHF1-208ENST00000486845 EPHA7Q15375 998 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 ANGPT1Q15389 498 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 NEK8Q86SG6 692 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 RXFP1Q9HBX9 757 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 BMP2KQ9NSY1 1161 aaPredicted RBP22.36■■□□□ 1.17
PHF1-208ENST00000486845 WNT16Q9UBV4 365 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 IPPQ9Y573 584 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 CYP46A1Q9Y6A2 500 aa22.36■■□□□ 1.17
PHF1-208ENST00000486845 ARL5CA6NH57 179 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 TBX3O15119 743 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 NARSO43776 548 aaKnown RBP22.35■■□□□ 1.17
PHF1-208ENST00000486845 N4BP1O75113 896 aaKnown RBP22.35■■□□□ 1.17
PHF1-208ENST00000486845 NR1I2O75469 434 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 NCBP1Q09161 790 aaKnown RBP22.35■■□□□ 1.17
PHF1-208ENST00000486845 KIAA0319Q5VV43 1072 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 NOTUMQ6P988 496 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 TAS1R1Q7RTX1 841 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 RNF168Q8IYW5 571 aaPredicted RBP22.35■■□□□ 1.17
PHF1-208ENST00000486845 ADSSL1Q8N142 457 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 HDAC7Q8WUI4 952 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 NAP1L4Q99733 375 aaKnown RBP22.35■■□□□ 1.17
PHF1-208ENST00000486845 EPS15L1Q9UBC2 864 aa22.35■■□□□ 1.17
PHF1-208ENST00000486845 ARID2Q68CP9 1835 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 MARCH6O60337 910 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 TSPAN1O60635 241 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 EFEMP2O95967 443 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 C1RP00736 705 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 RFX1P22670 979 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 MLH1P40692 756 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 DSC1Q08554 894 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 MXD4Q14582 209 aaPredicted RBP22.34■■□□□ 1.17
PHF1-208ENST00000486845 XKR9Q5GH70 373 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 SMG7Q92540 1137 aaKnown RBP22.34■■□□□ 1.17
PHF1-208ENST00000486845 NXPE3Q969Y0 559 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 GAD1Q99259 594 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 MTRQ99707 1265 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 EIF2AQ9BY44 585 aaKnown RBP22.34■■□□□ 1.17
PHF1-208ENST00000486845 ZSWIM4Q9H7M6 989 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 KCNJ14Q9UNX9 436 aa22.34■■□□□ 1.17
PHF1-208ENST00000486845 STK25O00506 426 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 CCNT1O60563 726 aaKnown RBP22.33■■□□□ 1.17
PHF1-208ENST00000486845 CFHP08603 1231 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 PTENP60484 403 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 DSG1Q02413 1049 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 STK3Q13188 491 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 NCAPH2Q6IBW4 605 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 HACE1Q8IYU2 909 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 RSAD2Q8WXG1 361 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 HAS1Q92839 578 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 PHF20Q9BVI0 1012 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 COLEC11Q9BWP8 271 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 CSRNP2Q9H175 543 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 PLEKHA4Q9H4M7 779 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 RGL1Q9NZL6 768 aa22.33■■□□□ 1.17
PHF1-208ENST00000486845 DMDP11532 3685 aa22.33■■□□□ 1.16
PHF1-208ENST00000486845 TDRD15B5MCY1 1934 aaKnown RBP22.32■■□□□ 1.16
PHF1-208ENST00000486845 EPB41L2O43491 1005 aaKnown RBP22.32■■□□□ 1.16
PHF1-208ENST00000486845 RFPL2O75678 378 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 CDKL5O76039 1030 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 PAPLNO95428 1278 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 XBP1P17861 261 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 SCNN1GP51170 649 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 TFDP1Q14186 410 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 DYDC2Q96IM9 177 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 MYADMQ96S97 322 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 RNF39Q9H2S5 420 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.32■■□□□ 1.16
PHF1-208ENST00000486845 GIT1Q9Y2X7 761 aa22.32■■□□□ 1.16
PHF1-208ENST00000486845 INO80B-WBP1J3KQ70 363 aa22.31■■□□□ 1.16
PHF1-208ENST00000486845 SRFP11831 508 aa22.31■■□□□ 1.16
PHF1-208ENST00000486845 CYP4A11Q02928 519 aa22.31■■□□□ 1.16
PHF1-208ENST00000486845 POU5F1BQ06416 359 aa22.31■■□□□ 1.16
PHF1-208ENST00000486845 ERMP1Q7Z2K6 904 aa22.31■■□□□ 1.16
PHF1-208ENST00000486845 IFNLR1Q8IU57 520 aaPredicted RBP22.31■■□□□ 1.16
PHF1-208ENST00000486845 GPR65Q8IYL9 337 aa22.31■■□□□ 1.16
PHF1-208ENST00000486845 SLFN12Q8IYM2 578 aa22.31■■□□□ 1.16
PHF1-208ENST00000486845 SLC44A3Q8N4M1 653 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms