RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 B4GALT3O60512 393 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 XYLBO75191 536 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 OFD1O75665 1012 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 DDHD2O94830 711 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 CAVIN2O95810 425 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 FGAP02671 866 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 HNRNPA1P09651 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 ITGB5P18084 799 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 CCNE1P24864 410 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 ACTR2P61160 394 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 HAND2P61296 217 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 SIM1P81133 766 aaPredicted RBP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 DSG1Q02413 1049 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 CREB5Q02930 508 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 PPM1LQ5SGD2 360 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 LIN9Q5TKA1 542 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 TSHZ3Q63HK5 1081 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 TWF2Q6IBS0 349 aaKnown RBP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 LILRA6Q6PI73 481 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 ZNF710Q8N1W2 664 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 CHCHD4Q8N4Q1 142 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 ING5Q8WYH8 240 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 IRF7Q92985 503 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 ZC3H10Q96K80 434 aaKnown RBP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 SCLT1Q96NL6 688 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 PIGSQ96S52 555 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 MAP7D2Q96T17 732 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 SDF4Q9BRK5 362 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 TRMT61BQ9BVS5 477 aaKnown RBP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 RNF41Q9H4P4 317 aaPredicted RBP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 CHST12Q9NRB3 414 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 KANSL3Q9P2N6 904 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 KCNH3Q9ULD8 1083 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 AKT3Q9Y243 479 aa6.78□□□□□ -1.32
PDZD11-204ENST00000486461 PRG3Q9Y2Y8 225 aaPredicted RBP6.78□□□□□ -1.32
PDZD11-204ENST00000486461 NOTCH4Q99466 2003 aa6.77□□□□□ -1.32
PDZD11-204ENST00000486461 MYH9P35579 1960 aaKnown RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 CCDC163A0A0D9SF12 145 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 SPAARA0A1B0GVQ0 90 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 MEIS3P2A8K0S8 358 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 CDX4O14627 284 aaPredicted RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 KHNYNO15037 678 aaKnown RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 CCL16O15467 120 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 AKAP3O75969 853 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 C22orf31O95567 290 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 DARSP14868 501 aaKnown RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 FGFR4P22455 802 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 TMOD1P28289 359 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 HOXC13P31276 330 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 CLCN3P51790 818 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 GRM2Q14416 872 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 ELF2Q15723 593 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 PLK5Q496M5 336 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 FAM160B1Q5W0V3 765 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 TANGO2Q6ICL3 276 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 USP17L6PQ6QN14 398 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 Q6ZS52 159 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 SIRT2Q8IXJ6 389 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 RNF168Q8IYW5 571 aaPredicted RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 ELSPBP1Q96BH3 223 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 MCRS1Q96EZ8 462 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 ZNF668Q96K58 619 aaPredicted RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 TRAIPQ9BWF2 469 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 CLMPQ9H6B4 373 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 ZNF334Q9HCZ1 680 aaPredicted RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 TRPV5Q9NQA5 729 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 JADE2Q9NQC1 790 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 RBM12Q9NTZ6 932 aaKnown RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 GDE1Q9NZC3 331 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 FNIP2Q9P278 1114 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 RAXQ9Y2V3 346 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 MRPS23Q9Y3D9 190 aaKnown RBP6.77□□□□□ -1.33
PDZD11-204ENST00000486461 UBIAD1Q9Y5Z9 338 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 FREM2Q5SZK8 3169 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 LAMA5O15230 3695 aa6.77□□□□□ -1.33
PDZD11-204ENST00000486461 PNMA6FA0A0J9YX94 578 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 BCLAF3A2AJT9 711 aaKnown RBP6.76□□□□□ -1.33
PDZD11-204ENST00000486461 ZBTB42B2RXF5 422 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 MAGEB2O15479 319 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 RHOBTB1O94844 696 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 ATG7O95352 703 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 C8AP07357 584 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 RPL17P18621 184 aaKnown RBP6.76□□□□□ -1.33
PDZD11-204ENST00000486461 GDI1P31150 447 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 HOXA9P31269 272 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 OR1G1P47890 313 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 PXNP49023 591 aaPredicted RBP6.76□□□□□ -1.33
PDZD11-204ENST00000486461 RAB27AP51159 221 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 CREMQ03060 361 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 PABPC1LQ4VXU2 614 aaKnown RBP6.76□□□□□ -1.33
PDZD11-204ENST00000486461 DGKKQ5KSL6 1271 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 EFCAB12Q6NXP0 572 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 C1orf228Q6PIY5 440 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 TBC1D10CQ8IV04 446 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 MAP4K3Q8IVH8 894 aa6.76□□□□□ -1.33
PDZD11-204ENST00000486461 GPR65Q8IYL9 337 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms