RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 CCDC83Q8IWF9 413 aa24.9■■□□□ 1.58
SREBF1-214ENST00000486311 C8orf76Q96K31 380 aa24.9■■□□□ 1.58
SREBF1-214ENST00000486311 POLR3FQ9H1D9 316 aaPredicted RBP24.9■■□□□ 1.58
SREBF1-214ENST00000486311 POMKQ9H5K3 350 aa24.9■■□□□ 1.58
SREBF1-214ENST00000486311 TUFT1Q9NNX1 390 aa24.9■■□□□ 1.58
SREBF1-214ENST00000486311 NR2E1Q9Y466 385 aa24.9■■□□□ 1.58
SREBF1-214ENST00000486311 USO1O60763 962 aaKnown RBP24.89■■□□□ 1.58
SREBF1-214ENST00000486311 ARF4P18085 180 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-214ENST00000486311 MTHFRP42898 656 aa24.89■■□□□ 1.58
SREBF1-214ENST00000486311 ORC2Q13416 577 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-214ENST00000486311 PTPN21Q16825 1174 aa24.89■■□□□ 1.58
SREBF1-214ENST00000486311 CATSPER3Q86XQ3 398 aa24.89■■□□□ 1.58
SREBF1-214ENST00000486311 C12orf76Q8N812 135 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-214ENST00000486311 GAD1Q99259 594 aa24.89■■□□□ 1.58
SREBF1-214ENST00000486311 FOXP1Q9H334 677 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-214ENST00000486311 ARL5CA6NH57 179 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 LILRB3O75022 631 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 SIGLEC14Q08ET2 396 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 RARS2Q5T160 578 aaKnown RBP24.88■■□□□ 1.57
SREBF1-214ENST00000486311 COLGALT2Q8IYK4 626 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 PBXIP1Q96AQ6 731 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 FBXL18Q96ME1 805 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 RIPOR3Q96MK2 946 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 POLR3CQ9BUI4 534 aaPredicted RBP24.88■■□□□ 1.57
SREBF1-214ENST00000486311 EMILIN2Q9BXX0 1053 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 MARCH5Q9NX47 278 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 DBR1Q9UK59 544 aaKnown RBP24.88■■□□□ 1.57
SREBF1-214ENST00000486311 HES2Q9Y543 173 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 PIEZO1Q92508 2521 aa24.88■■□□□ 1.57
SREBF1-214ENST00000486311 MED24O75448 989 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 SP100P23497 879 aaPredicted RBP24.87■■□□□ 1.57
SREBF1-214ENST00000486311 MLH1P40692 756 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 DSC1Q08554 894 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 KIAA1841Q6NSI8 718 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 MCPH1Q8NEM0 835 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 KLHL5Q96PQ7 755 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 NACC1Q96RE7 527 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 TRIM6Q9C030 488 aaPredicted RBP24.87■■□□□ 1.57
SREBF1-214ENST00000486311 GPRC5CQ9NQ84 441 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 TSHZ2Q9NRE2 1034 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 GIT1Q9Y2X7 761 aa24.87■■□□□ 1.57
SREBF1-214ENST00000486311 PRG3Q9Y2Y8 225 aaPredicted RBP24.87■■□□□ 1.57
SREBF1-214ENST00000486311 B4GALT5O43286 388 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 SOD2P04179 222 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 CNPP09543 421 aaKnown RBP24.86■■□□□ 1.57
SREBF1-214ENST00000486311 WEE2P0C1S8 567 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 OR52Z1P0C646 297 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 ZNF174Q15697 407 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 ATAT1Q5SQI0 421 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 CABP7Q86V35 215 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 ALYREFQ86V81 257 aaKnown RBP24.86■■□□□ 1.57
SREBF1-214ENST00000486311 HACE1Q8IYU2 909 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 FBXO18Q8NFZ0 1043 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 ZSCAN31Q96LW9 406 aaPredicted RBP24.86■■□□□ 1.57
SREBF1-214ENST00000486311 ZFP42Q96MM3 310 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 HERC2P3Q9BVR0 1158 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 NXF3Q9H4D5 531 aaKnown RBP24.86■■□□□ 1.57
SREBF1-214ENST00000486311 MRPL17Q9NRX2 175 aaKnown RBP24.86■■□□□ 1.57
SREBF1-214ENST00000486311 MIOSQ9NXC5 875 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 ARID2Q68CP9 1835 aa24.86■■□□□ 1.57
SREBF1-214ENST00000486311 A0A1B0GUA9 196 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 C2CD4DB7Z1M9 353 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 EFEMP2O95967 443 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 SSBP05455 408 aaKnown RBP eCLIP24.85■■□□□ 1.57
SREBF1-214ENST00000486311 RPA1P27694 616 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 OR1G1P47890 313 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 SCNN1GP51170 649 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 CLCN4P51793 760 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 HMGN5P82970 282 aaKnown RBP24.85■■□□□ 1.57
SREBF1-214ENST00000486311 KANK3Q6NY19 840 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 SLC27A1Q6PCB7 646 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 PPP4R3CPQ6ZMV5 832 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 MAEAQ7L5Y9 396 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 ERMNQ8TAM6 284 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 APOL6Q9BWW8 343 aa24.85■■□□□ 1.57
SREBF1-214ENST00000486311 LRRIQ4A6NIV6 560 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 KLRC2P26717 231 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 RBM25P49756 843 aaKnown RBP24.84■■□□□ 1.57
SREBF1-214ENST00000486311 CDCA2Q69YH5 1023 aaPredicted RBP24.84■■□□□ 1.57
SREBF1-214ENST00000486311 RNF168Q8IYW5 571 aaPredicted RBP24.84■■□□□ 1.57
SREBF1-214ENST00000486311 ASIC4Q96FT7 647 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 PRIMPOLQ96LW4 560 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 SFXN1Q9H9B4 322 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 SH2B1Q9NRF2 756 aaPredicted RBP24.84■■□□□ 1.57
SREBF1-214ENST00000486311 PRMT7Q9NVM4 692 aaPredicted RBP24.84■■□□□ 1.57
SREBF1-214ENST00000486311 SSX2IPQ9Y2D8 614 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 ZNF318Q5VUA4 2279 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 WDFY4Q6ZS81 3184 aa24.84■■□□□ 1.57
SREBF1-214ENST00000486311 ZMYM2Q9UBW7 1377 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 NPTXRO95502 500 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 URODP06132 367 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 TRAPPC10P48553 1259 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 TTC38Q5R3I4 469 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 POTEGQ6S5H5 508 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 TMC5Q6UXY8 1006 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 TAS1R1Q7RTX1 841 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 ZBTB33Q86T24 672 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 CDR2LQ86X02 465 aaPredicted RBP24.83■■□□□ 1.57
SREBF1-214ENST00000486311 NOSTRINQ8IVI9 506 aa24.83■■□□□ 1.57
SREBF1-214ENST00000486311 FBXL6Q8N531 539 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms