RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CARNS1A5YM72 827 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 MEIS2O14770 477 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 TEX28O15482 410 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 C22orf31O95567 290 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 AVPP01185 164 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 VTNP04004 478 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 ACTR2P61160 394 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 TRAF1Q13077 416 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 MTMR1Q13613 665 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 SIM2Q14190 667 aaPredicted RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 SF3A2Q15428 464 aaKnown RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 AASDHQ4L235 1098 aaPredicted RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 MSS51Q4VC12 460 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 OTUD7AQ8TE49 926 aaPredicted RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 NELL2Q99435 816 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 NT5C3AQ9H0P0 336 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 CHRDQ9H2X0 955 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 RNF41Q9H4P4 317 aaPredicted RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 HELLSQ9NRZ9 838 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 SLC9A2Q9UBY0 812 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 ZFP37Q9Y6Q3 630 aaPredicted RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 ITPR1Q14643 2758 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 LOC400499M0QZD8 3231 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 AKAP13Q12802 2813 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 IGKV6D-21A0A0A0MT36 114 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 PNMA6FA0A0J9YX94 578 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 B4E1Z4 1266 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 NCAM2O15394 837 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 HBP1O60381 514 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 ATG7O95352 703 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 TOP3BO95985 862 aaKnown RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 GLUD1P00367 558 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 NT5C2P49902 561 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 SLC26A2P50443 739 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 PFKPQ01813 784 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 SRSF5Q13243 272 aaKnown RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 CCDC6Q16204 474 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 STPG1Q5TH74 334 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 PSAPL1Q6NUJ1 521 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 RNF19BQ6ZMZ0 732 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 HDAC7Q8WUI4 952 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 ZCCHC14Q8WYQ9 949 aaKnown RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 RSPH1Q8WYR4 309 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 FAM227BQ96M60 508 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 RPS6KC1Q96S38 1066 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 ADAMTS10Q9H324 1103 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 JADE2Q9NQC1 790 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 MRPL17Q9NRX2 175 aaKnown RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 ZSWIM5Q9P217 1185 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 CDH7Q9ULB5 785 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 DDX19BQ9UMR2 479 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 BAZ2BQ9UIF8 2168 aaKnown RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 HELZ2Q9BYK8 2649 aaKnown RBP9.41□□□□□ -0.9
XRN1-212ENST00000486211 DMXL2Q8TDJ6 3036 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 DOCK6Q96HP0 2047 aa9.41□□□□□ -0.9
XRN1-212ENST00000486211 TTC24A2A3L6 582 aaPredicted RBP9.4□□□□□ -0.9
XRN1-212ENST00000486211 MEIS3P2A8K0S8 358 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 C2CD2LO14523 706 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 GIPC1O14908 333 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 AXIN1O15169 862 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 EFEMP2O95967 443 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 ADH1AP07327 375 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 EIF4BP23588 611 aaKnown RBP9.4□□□□□ -0.9
XRN1-212ENST00000486211 FSHRP23945 695 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 CLCN1P35523 988 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 NOMO2Q5JPE7 1267 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 ZNF852Q6ZMS4 543 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 RNF168Q8IYW5 571 aaPredicted RBP9.4□□□□□ -0.9
XRN1-212ENST00000486211 LINC01465Q8N7H1 131 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 SMARCC2Q8TAQ2 1214 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 LPPQ93052 612 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 PHKBQ93100 1093 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 PIDD1Q9HB75 910 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 RXFP1Q9HBX9 757 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 ZDHHC7Q9NXF8 308 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 STK39Q9UEW8 545 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 DPP7Q9UHL4 492 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 DACH1Q9UI36 760 aa9.4□□□□□ -0.9
XRN1-212ENST00000486211 MTCL1Q9Y4B5 1905 aaKnown RBP9.39□□□□□ -0.91
XRN1-212ENST00000486211 NFASCO94856 1347 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 CHURC1-FNTBB4DL54 471 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 MAFGO15525 162 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 OFD1O75665 1012 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 C1RP00736 705 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 SOD2P04179 222 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 ZNF806P0C7X5 589 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 ATP4AP20648 1035 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 FGFR4P22455 802 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 PHKA2P46019 1235 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 FNTBP49356 437 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms