RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SCLT1Q96NL6 688 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 FTHL17Q9BXU8 183 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 CLEC1BQ9P126 229 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 RWDD3Q9Y3V2 267 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 ANK1P16157 1881 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 DMDP11532 3685 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 ENPP3O14638 875 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 SRGAP2CP0DJJ0 459 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 PTENP60484 403 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 MCM6Q14566 821 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 FAM102BQ5T8I3 360 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 CDCA2Q69YH5 1023 aaPredicted RBP14.28□□□□□ -0.12
SSR4-211ENST00000486204 FAM43BQ6ZT52 329 aaPredicted RBP14.28□□□□□ -0.12
SSR4-211ENST00000486204 SRGAP1Q7Z6B7 1085 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 ADGRA3Q8IWK6 1321 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 SMRP1Q8NCR6 262 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 LARP4BQ92615 738 aaKnown RBP14.28□□□□□ -0.12
SSR4-211ENST00000486204 RPGRIP1Q96KN7 1286 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 RIPOR3Q96MK2 946 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 NFKBIZQ9BYH8 718 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 RGS18Q9NS28 235 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 STK17AQ9UEE5 414 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 SPTBN4Q9H254 2564 aa14.28□□□□□ -0.12
SSR4-211ENST00000486204 C9IYK1 514 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 HIP1RO75146 1068 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 PDGFBP01127 241 aaPredicted RBP14.27□□□□□ -0.13
SSR4-211ENST00000486204 SSBP05455 408 aaKnown RBP eCLIP14.27□□□□□ -0.13
SSR4-211ENST00000486204 NCLP19338 710 aaKnown RBP14.27□□□□□ -0.13
SSR4-211ENST00000486204 SFPQP23246 707 aaKnown RBP eCLIP14.27□□□□□ -0.13
SSR4-211ENST00000486204 TXLNAP40222 546 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 NAMPTP43490 491 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 PHKA2P46019 1235 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 ME1P48163 572 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 MBTD1Q05BQ5 628 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 COASYQ13057 564 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 TFDP1Q14186 410 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 E2F4Q16254 413 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 AMHR2Q16671 573 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 RASSF8Q8NHQ8 419 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 KIFAP3Q92845 792 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 NKD2Q969F2 451 aaPredicted RBP14.27□□□□□ -0.13
SSR4-211ENST00000486204 PPP2R3CQ969Q6 453 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 SPATA32Q96LK8 384 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 ADAM2Q99965 735 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 PHF7Q9BWX1 381 aaPredicted RBP14.27□□□□□ -0.13
SSR4-211ENST00000486204 INO80BQ9C086 356 aaPredicted RBP14.27□□□□□ -0.13
SSR4-211ENST00000486204 RC3H2Q9HBD1 1191 aaKnown RBP14.27□□□□□ -0.13
SSR4-211ENST00000486204 AGPAT5Q9NUQ2 364 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 KCND2Q9NZV8 630 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 CCDC39Q9UFE4 941 aa14.27□□□□□ -0.13
SSR4-211ENST00000486204 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
SSR4-211ENST00000486204 NPHP3-ACAD11A0A0J9YXS1 232 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 LRRIQ4A6NIV6 560 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 KRT37O76014 449 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 LINC00271P0C7V0 271 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 RESP18Q5W5W9 173 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 REEP2Q9BRK0 252 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 TIPINQ9BVW5 301 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 CCDC113Q9H0I3 377 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 USP15Q9Y4E8 981 aaPredicted RBP14.26□□□□□ -0.13
SSR4-211ENST00000486204 MYO7AQ13402 2215 aa14.26□□□□□ -0.13
SSR4-211ENST00000486204 TSPAN1O60635 241 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 EDN1P05305 212 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 HOXA11P31270 313 aaPredicted RBP14.25□□□□□ -0.13
SSR4-211ENST00000486204 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
SSR4-211ENST00000486204 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
SSR4-211ENST00000486204 RAD51AP2Q09MP3 1159 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 PPP2R5AQ15172 486 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 PTPN21Q16825 1174 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 RRAGBQ5VZM2 374 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 CCDC73Q6ZRK6 1079 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 CATSPER4Q7RTX7 472 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 FRMD5Q7Z6J6 570 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 EFHBQ8N7U6 833 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 PDILTQ8N807 584 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 DRC1Q96MC2 740 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 KIFC3Q9BVG8 833 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 SCAND2PQ9GZW5 306 aaPredicted RBP14.25□□□□□ -0.13
SSR4-211ENST00000486204 GDPD2Q9HCC8 539 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 C1orf112Q9NSG2 853 aa14.25□□□□□ -0.13
SSR4-211ENST00000486204 RBM19Q9Y4C8 960 aaKnown RBP14.25□□□□□ -0.13
SSR4-211ENST00000486204 MED19A0JLT2 244 aaPredicted RBP14.24□□□□□ -0.13
SSR4-211ENST00000486204 DENND3A2RUS2 1198 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 B4GALT5O43286 388 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 ATF7P17544 494 aaPredicted RBP14.24□□□□□ -0.13
SSR4-211ENST00000486204 STAT6P42226 847 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 NPTX2P47972 431 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 ZNF131P52739 623 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 FAM189BP81408 668 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 CAMK1Q14012 370 aa14.24□□□□□ -0.13
SSR4-211ENST00000486204 DHX8Q14562 1220 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms