RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, human

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-208	ENST00000486159	SFN	P31947	248 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	JAK3	P52333	1124 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	BCAR1	P56945	870 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	UBE3A	Q05086	875 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	NR5A1	Q13285	461 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	NONO	Q15233	471 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	XKR3	Q5GH77	459 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ODR4	Q5SWX8	454 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ANKRD54	Q6NXT1	300 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	DAGLB	Q8NCG7	672 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	TMEM143	Q96AN5	459 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	NLRP4	Q96MN2	994 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	TIGD1	Q96MW7	591 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ZNF558	Q96NG5	402 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	FUCA2	Q9BTY2	467 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	VN1R3	Q9BXE9	311 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	RBSN	Q9H1K0	784 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	SMOC2	Q9H3U7	446 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	NRDE2	Q9H7Z3	1164 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	MINDY3	Q9H8M7	445 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ENTPD7	Q9NQZ7	604 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	SPG21	Q9NZD8	308 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	RGL1	Q9NZL6	768 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	DNAJB4	Q9UDY4	337 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CLIC4	Q9Y696	253 aa		10.44	□□□□□ -0.74
TMEM39A-208	ENST00000486159	BTBD18	B2RXH4	712 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CLASP2	O75122	1294 aa	Known RBP	10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CA8	P35219	290 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PHKA2	P46019	1235 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CEBPZ	Q03701	1054 aa	Known RBP	10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CTTN	Q14247	550 aa	Known RBP	10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CBX2	Q14781	532 aa	Predicted RBP	10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PTPA	Q15257	358 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PIK3AP1	Q6ZUJ8	805 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	TMC7	Q7Z402	723 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ZNF280B	Q86YH2	543 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ABI1	Q8IZP0	508 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	LRRC43	Q8N309	656 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	FSIP1	Q8NA03	581 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ENGASE	Q8NFI3	743 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	EDA	Q92838	391 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PPP2R3C	Q969Q6	453 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	DYDC2	Q96IM9	177 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PPP1R9B	Q96SB3	815 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	GBP3	Q9H0R5	595 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	IFT122	Q9HBG6	1241 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	KCNMB3	Q9NPA1	279 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PIN4	Q9Y237	131 aa	Known RBP	10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	INPP5F	Q9Y2H2	1132 aa		10.43	□□□□□ -0.74
TMEM39A-208	ENST00000486159	TMEM221	A6NGB7	291 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	C2orf71	A6NGG8	1288 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159		M0R296	226 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CCNT1	O60563	726 aa	Known RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	NR1I2	O75469	434 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	OFD1	O75665	1012 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PPP1R37	O75864	691 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	DDHD2	O94830	711 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CXCL14	O95715	111 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PDGFB	P01127	241 aa	Predicted RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	SRGAP2C	P0DJJ0	459 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	MYB	P10242	640 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	EPCAM	P16422	314 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PSMC5	P62195	406 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	ZXDA	P98168	799 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CYP4A11	Q02928	519 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PPP2R5C	Q13362	524 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	SNW1	Q13573	536 aa	Known RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	UBXN11	Q5T124	520 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	TWF2	Q6IBS0	349 aa	Known RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	NCAPH2	Q6IBW4	605 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	SASS6	Q6UVJ0	657 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	TMEM184A	Q6ZMB5	413 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	AGMO	Q6ZNB7	445 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	KRT25	Q7Z3Z0	450 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	MRPL43	Q8N983	215 aa	Known RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	KRI1	Q8N9T8	703 aa	Known RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PRSS33	Q8NF86	280 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	PHF7	Q9BWX1	381 aa	Predicted RBP	10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CYP26B1	Q9NR63	512 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	FAM105A	Q9NUU6	356 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	TBC1D13	Q9NVG8	400 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	LZTS1	Q9Y250	596 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	HCFC2	Q9Y5Z7	792 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CHD8	Q9HCK8	2581 aa		10.42	□□□□□ -0.74
TMEM39A-208	ENST00000486159	CCDC194	A0A1B0GVG4	234 aa		10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159		F8W810	466 aa		10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	EOMES	O95936	686 aa		10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	GALT	P07902	379 aa		10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	HOXA11	P31270	313 aa	Predicted RBP	10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	QARS	P47897	775 aa	Known RBP	10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	SLC11A1	P49279	550 aa		10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	VCP	P55072	806 aa	Known RBP	10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	NHLH1	Q02575	133 aa		10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	SPIRE1	Q08AE8	756 aa		10.41	□□□□□ -0.74
TMEM39A-208	ENST00000486159	MOXD1	Q6UVY6	613 aa		10.41	□□□□□ -0.74

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