RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ZNF687Q8N1G0 1237 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 KDF1Q8NAX2 398 aaPredicted RBP11.06□□□□□ -0.64
SND1-213ENST00000486037 BRF1Q92994 677 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 RPS6KC1Q96S38 1066 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 KXD1Q9BQD3 176 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 KRT23Q9C075 422 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 PIDD1Q9HB75 910 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 ZNF302Q9NR11 478 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 RAB23Q9ULC3 237 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 SDK1Q7Z5N4 2213 aa11.06□□□□□ -0.64
SND1-213ENST00000486037 ASH1LQ9NR48 2969 aaKnown RBP11.06□□□□□ -0.64
SND1-213ENST00000486037 MTCL1Q9Y4B5 1905 aaKnown RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 hCG_1642624A0A1W2PR95 340 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 SRRM3A6NNA2 597 aaPredicted RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 SH2B2O14492 632 aaPredicted RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 NRP1O14786 923 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 TGM5O43548 720 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 LRP3O75074 770 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 EFEMP2O95967 443 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 TOP3BO95985 862 aaKnown RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 SOD2P04179 222 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 RPS9P46781 194 aaKnown RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 RNASELQ05823 741 aaKnown RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 DRP2Q13474 957 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 SF3A2Q15428 464 aaKnown RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 CCDC6Q16204 474 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 ME3Q16798 604 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 IL31Q6EBC2 164 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 EFCAB12Q6NXP0 572 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 POTEHQ6S545 545 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 GLYCTKQ8IVS8 523 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 CELF5Q8N6W0 485 aaKnown RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 B3GALT6Q96L58 329 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
SND1-213ENST00000486037 HERC2P3Q9BVR0 1158 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 PSTPIP2Q9H939 334 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 CELSR3Q9NYQ7 3312 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 ITPR1Q14643 2758 aa11.05□□□□□ -0.64
SND1-213ENST00000486037 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
SND1-213ENST00000486037 ABCB7O75027 752 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 URODP06132 367 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 ADH1AP07327 375 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 FSHRP23945 695 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 DDIT3P35638 169 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 FGD1P98174 961 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 FAM160B1Q5W0V3 765 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 GLB1LQ6UWU2 654 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 RSPO2Q6UXX9 243 aaPredicted RBP11.04□□□□□ -0.64
SND1-213ENST00000486037 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 GRASPQ7Z6J2 395 aaPredicted RBP11.04□□□□□ -0.64
SND1-213ENST00000486037 NECAB1Q8N987 351 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 ITFG1Q8TB96 612 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 PHKBQ93100 1093 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 FAM126AQ9BYI3 521 aaPredicted RBP11.04□□□□□ -0.64
SND1-213ENST00000486037 PLA2G2FQ9BZM2 168 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
SND1-213ENST00000486037 RXFP1Q9HBX9 757 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 HEBP1Q9NRV9 189 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 CDH7Q9ULB5 785 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 WASF3Q9UPY6 502 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 PRG3Q9Y2Y8 225 aaPredicted RBP11.04□□□□□ -0.64
SND1-213ENST00000486037 NOTCH4Q99466 2003 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 F5P12259 2224 aa11.04□□□□□ -0.64
SND1-213ENST00000486037 BPTFQ12830 3046 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 GIPC1O14908 333 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 KCNK5O95279 499 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 RPL17P18621 184 aaKnown RBP11.03□□□□□ -0.64
SND1-213ENST00000486037 EVCP57679 992 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 SATB1Q01826 763 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
SND1-213ENST00000486037 LILRA6Q6PI73 481 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 CKAP2LQ8IYA6 745 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
SND1-213ENST00000486037 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
SND1-213ENST00000486037 FGF13Q92913 245 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
SND1-213ENST00000486037 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 CHRDQ9H2X0 955 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 LY9Q9HBG7 655 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 FAM105AQ9NUU6 356 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 ZDHHC7Q9NXF8 308 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 DACT1Q9NYF0 836 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 BRPF3Q9ULD4 1205 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 NDRG2Q9UN36 371 aaKnown RBP11.03□□□□□ -0.64
SND1-213ENST00000486037 FAN1Q9Y2M0 1017 aa11.03□□□□□ -0.64
SND1-213ENST00000486037 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
SND1-213ENST00000486037 GREB1Q4ZG55 1949 aa11.02□□□□□ -0.65
SND1-213ENST00000486037 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms