RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TRANK1O15050 2925 aa13.72□□□□□ -0.21
HMG20B-211ENST00000486028 CNTNAP2Q9UHC6 1331 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 H0YCG3 227 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 N4BP3O15049 544 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 LPXNO60711 386 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 FAM13AO94988 1023 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 LINC00271P0C7V0 271 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 ITGA4P13612 1032 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 KRT85P78386 507 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 NUCB2P80303 420 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 PTPROQ16827 1216 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 NOMO2Q5JPE7 1267 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 SV2BQ7L1I2 683 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 APBB1IPQ7Z5R6 666 aaPredicted RBP13.71□□□□□ -0.21
HMG20B-211ENST00000486028 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 LPPQ93052 612 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 REEP2Q9BRK0 252 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 EIF2AQ9BY44 585 aaKnown RBP13.71□□□□□ -0.21
HMG20B-211ENST00000486028 MRPL9Q9BYD2 267 aaKnown RBP13.71□□□□□ -0.21
HMG20B-211ENST00000486028 ARHGAP28Q9P2N2 729 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
HMG20B-211ENST00000486028 SLC16A4O15374 487 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
HMG20B-211ENST00000486028 OFD1O75665 1012 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 NPTXRO95502 500 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 LAG3P18627 525 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 SCP2P22307 547 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
HMG20B-211ENST00000486028 GIT2Q14161 759 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 AXDND1Q5T1B0 1012 aaPredicted RBP13.7□□□□□ -0.22
HMG20B-211ENST00000486028 SHC4Q6S5L8 630 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 LRRC55Q6ZSA7 311 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 PDILTQ8N807 584 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
HMG20B-211ENST00000486028 URGCPQ8TCY9 931 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 P2RX5Q93086 422 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 ZHX3Q9H4I2 956 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 CWH43Q9H720 699 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 RSAD1Q9HA92 442 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 PARVGQ9HBI0 331 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 FAM13BQ9NYF5 915 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 KANSL3Q9P2N6 904 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 INPP5FQ9Y2H2 1132 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 IPPQ9Y573 584 aa13.7□□□□□ -0.22
HMG20B-211ENST00000486028 A0A087X0B3 334 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 ZNF131P52739 623 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 RNASELQ05823 741 aaKnown RBP13.69□□□□□ -0.22
HMG20B-211ENST00000486028 STRN3Q13033 797 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 NT5DC1Q5TFE4 455 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 ATF7IP2Q5U623 682 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 AGMOQ6ZNB7 445 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
HMG20B-211ENST00000486028 MICALL1Q8N3F8 863 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 IQUBQ8NA54 791 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 KLHL23Q8NBE8 558 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 COLGALT1Q8NBJ5 622 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 TMEM161BQ8NDZ6 487 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
HMG20B-211ENST00000486028 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 MRPL38Q96DV4 380 aaKnown RBP13.69□□□□□ -0.22
HMG20B-211ENST00000486028 SPATA32Q96LK8 384 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
HMG20B-211ENST00000486028 SCAND2PQ9GZW5 306 aaPredicted RBP13.69□□□□□ -0.22
HMG20B-211ENST00000486028 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 PDZD7Q9H5P4 517 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 USP20Q9Y2K6 914 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 GIT1Q9Y2X7 761 aa13.69□□□□□ -0.22
HMG20B-211ENST00000486028 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 MYMKA6NI61 221 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 MEIS3P2A8K0S8 358 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 MAPTP10636 758 aaKnown RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 ABCD1P33897 745 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 ALDH7A1P49419 539 aaKnown RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 KCNT2Q6UVM3 1135 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 DYMQ7RTS9 669 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 LEO1Q8WVC0 666 aaPredicted RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 DDX12PQ92771 950 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 ZNF558Q96NG5 402 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 ACO2Q99798 780 aaKnown RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 PYM1Q9BRP8 204 aaKnown RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 APOL6Q9BWW8 343 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 LRRC27Q9C0I9 530 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 LMAN2LQ9H0V9 348 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 TNFSF13BQ9Y275 285 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 HES2Q9Y543 173 aa13.68□□□□□ -0.22
HMG20B-211ENST00000486028 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
HMG20B-211ENST00000486028 COL6A3P12111 3177 aa13.67□□□□□ -0.22
HMG20B-211ENST00000486028 MYH15Q9Y2K3 1946 aa13.67□□□□□ -0.22
HMG20B-211ENST00000486028 ARL5CA6NH57 179 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms