RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 NCOR1O75376 2440 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 CCDC169A6NNP5 214 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 H3BQ06 376 aaPredicted RBP20.32■□□□□ 0.84
COL1A1-206ENST00000485870 POMCP01189 267 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 PLA2G4BP0C869 781 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 BMP1P13497 986 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 KRT17Q04695 432 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 MAPK7Q13164 816 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 PLPP4Q5VZY2 271 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 RBM23Q86U06 439 aaKnown RBP20.32■□□□□ 0.84
COL1A1-206ENST00000485870 ZNF280BQ86YH2 543 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 HACE1Q8IYU2 909 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 KCTD17Q8N5Z5 321 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 SYT2Q8N9I0 419 aaPredicted RBP20.32■□□□□ 0.84
COL1A1-206ENST00000485870 RASSF8Q8NHQ8 419 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 DRC1Q96MC2 740 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 PDZD7Q9H5P4 517 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 UBN1Q9NPG3 1134 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 DNAJB4Q9UDY4 337 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 LZTS1Q9Y250 596 aa20.32■□□□□ 0.84
COL1A1-206ENST00000485870 ACKR2O00590 384 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 SLC26A4O43511 780 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 NCK2O43639 380 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 B4GALT3O60512 393 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 EDN1P05305 212 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 MLH1P40692 756 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 NPTX2P47972 431 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 NRIP1P48552 1158 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 EFNA5P52803 228 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 SLC12A3P55017 1021 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
COL1A1-206ENST00000485870 COL19A1Q14993 1142 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 KARSQ15046 597 aaKnown RBP20.31■□□□□ 0.84
COL1A1-206ENST00000485870 TMEM169Q96HH4 297 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 FAM193BQ96PV7 902 aaPredicted RBP20.31■□□□□ 0.84
COL1A1-206ENST00000485870 GAD1Q99259 594 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 TCF25Q9BQ70 676 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 ZSCAN16Q9H4T2 348 aaPredicted RBP20.31■□□□□ 0.84
COL1A1-206ENST00000485870 ENTPD7Q9NQZ7 604 aa20.31■□□□□ 0.84
COL1A1-206ENST00000485870 MYH11P35749 1972 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 ARL5CA6NH57 179 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 SFI1A8K8P3 1242 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 FSCN2O14926 492 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 N4BP3O15049 544 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 LINC01565O15544 149 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 DDHD2O94830 711 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 GALTP07902 379 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 AKAP5P24588 427 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 GUCY2CP25092 1073 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 SLC11A1P49279 550 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 DHX8Q14562 1220 aaKnown RBP20.3■□□□□ 0.84
COL1A1-206ENST00000485870 LEXMQ3ZCV2 418 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 SPECC1Q5M775 1068 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
COL1A1-206ENST00000485870 TMEM173Q86WV6 379 aaPredicted RBP20.3■□□□□ 0.84
COL1A1-206ENST00000485870 SPRYD3Q8NCJ5 442 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
COL1A1-206ENST00000485870 ZFP42Q96MM3 310 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 USP28Q96RU2 1077 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 UHRF1Q96T88 793 aaPredicted RBP20.3■□□□□ 0.84
COL1A1-206ENST00000485870 TIPINQ9BVW5 301 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 KMT5AQ9NQR1 393 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 KANSL3Q9P2N6 904 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 PARP2Q9UGN5 583 aa20.3■□□□□ 0.84
COL1A1-206ENST00000485870 FBXO2Q9UK22 296 aaPredicted RBP20.3■□□□□ 0.84
COL1A1-206ENST00000485870 NPHP3-ACAD11A0A0J9YXS1 232 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 K7ERI5 159 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 PER2O15055 1255 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 PLCG1P19174 1290 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 SCNN1GP51170 649 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 CACNB1Q02641 598 aaPredicted RBP20.29■□□□□ 0.84
COL1A1-206ENST00000485870 CTC1Q2NKJ3 1217 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 EEF1DP3Q658K8 133 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 PDE12Q6L8Q7 609 aaKnown RBP20.29■□□□□ 0.84
COL1A1-206ENST00000485870 TMC7Q7Z402 723 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 LRRC15Q8TF66 581 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 BCL7CQ8WUZ0 217 aaPredicted RBP20.29■□□□□ 0.84
COL1A1-206ENST00000485870 NECAB3Q96P71 396 aaPredicted RBP20.29■□□□□ 0.84
COL1A1-206ENST00000485870 TLE6Q9H808 572 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 KLK14Q9P0G3 267 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 GIT1Q9Y2X7 761 aa20.29■□□□□ 0.84
COL1A1-206ENST00000485870 PHLPP2Q6ZVD8 1323 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 TDRD15B5MCY1 1934 aaKnown RBP20.28■□□□□ 0.84
COL1A1-206ENST00000485870 MYH15Q9Y2K3 1946 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 SLC16A4O15374 487 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 LTBRP36941 435 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 DLX2Q07687 328 aaPredicted RBP20.28■□□□□ 0.84
COL1A1-206ENST00000485870 CLUL1Q15846 466 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 NT5DC1Q5TFE4 455 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 USP49Q70CQ1 688 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 GPBP1Q86WP2 473 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.28■□□□□ 0.84
COL1A1-206ENST00000485870 IGSF21Q96ID5 467 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 EPSTI1Q96J88 318 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 CLIC6Q96NY7 704 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 ADPGKQ9BRR6 497 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 BLOC1S4Q9NUP1 217 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 MIOSQ9NXC5 875 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 ARHGAP28Q9P2N2 729 aa20.28■□□□□ 0.84
COL1A1-206ENST00000485870 SRPRBQ9Y5M8 271 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms