RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	RGS18	Q9NS28	235 aa		13.93	□□□□□ -0.18
HDAC7-223	ENST00000485796	HES2	Q9Y543	173 aa		13.93	□□□□□ -0.18
HDAC7-223	ENST00000485796	ZBBX	A8MT70	800 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	GRXCR1	A8MXD5	290 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796		C9IYK1	514 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796		H0YCG3	227 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	TGFB1I1	O43294	461 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	NPTXR	O95502	500 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	PFKM	P08237	780 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	ATF7	P17544	494 aa	Predicted RBP	13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	PROZ	P22891	400 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	ADSS	P30520	456 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	GATM	P50440	423 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	FAM189B	P81408	668 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	STRN3	Q13033	797 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	IKBKE	Q14164	716 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	SEZ6	Q53EL9	994 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	ZBTB41	Q5SVQ8	909 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	TWF2	Q6IBS0	349 aa	Known RBP	13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	FAM117B	Q6P1L5	589 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	CRIPAK	Q8N1N5	446 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	CEP120	Q8N960	986 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	SMG8	Q8ND04	991 aa	Known RBP	13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	SLC17A8	Q8NDX2	589 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	APBB2	Q92870	758 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	LPP	Q93052	612 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	PRIMPOL	Q96LW4	560 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	ACCS	Q96QU6	501 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	MRPL4	Q9BYD3	311 aa	Known RBP	13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	CXCL16	Q9H2A7	254 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	CHST12	Q9NRB3	414 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	RNF19A	Q9NV58	838 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	PCDHB13	Q9Y5F0	798 aa		13.92	□□□□□ -0.18
HDAC7-223	ENST00000485796	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	MEFV	O15553	781 aa	Predicted RBP	13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	PIGR	P01833	764 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	HARS	P12081	509 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	ZSCAN20	P17040	1043 aa	Predicted RBP	13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	PRCP	P42785	496 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	BMT2	Q1RMZ1	405 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	TMEM132A	Q24JP5	1023 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	RBM43	Q6ZSC3	357 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	STXBP4	Q6ZWJ1	553 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	ZNF598	Q86UK7	904 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	TMEM192	Q8IY95	271 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	BICD1	Q96G01	975 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	FTHL17	Q9BXU8	183 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	CDT1	Q9H211	546 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	NXF3	Q9H4D5	531 aa	Known RBP	13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	FAM105A	Q9NUU6	356 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	ANKFY1	Q9P2R3	1169 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	TNFSF13B	Q9Y275	285 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	PCDHB2	Q9Y5E7	798 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	TRIOBP	Q9H2D6	2365 aa		13.91	□□□□□ -0.18
HDAC7-223	ENST00000485796	PPP1R3G	B7ZBB8	358 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	CLIC2	O15247	247 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	EIF3D	O15371	548 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	UPP2	O95045	317 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	LETM1	O95202	739 aa	Predicted RBP	13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	ACTN1	P12814	892 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	AXL	P30530	894 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	BMP8B	P34820	402 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	LIG4	P49917	911 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	ALCAM	Q13740	583 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	3e-7	■■■■■ 27.2
HDAC7-223	ENST00000485796	NOTUM	Q6P988	496 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	SLC27A1	Q6PCB7	646 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	SASS6	Q6UVJ0	657 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	ZPBP2	Q6X784	338 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	SLC24A5	Q71RS6	500 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	ECHDC2	Q86YB7	292 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	MYOCD	Q8IZQ8	938 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	RNF169	Q8NCN4	708 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	HVCN1	Q96D96	273 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	CBWD1	Q9BRT8	395 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	APOL6	Q9BWW8	343 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	KCTD10	Q9H3F6	313 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	SEMA6B	Q9H3T3	888 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	IPP	Q9Y573	584 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796	MICAL3	Q7RTP6	2002 aa		13.9	□□□□□ -0.18
HDAC7-223	ENST00000485796		A0A0U1RQF3	1178 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	HNRNPDL	O14979	420 aa	Known RBP	13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	N4BP3	O15049	544 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	TOM1L1	O75674	476 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	BAIAP3	O94812	1187 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	FGFR1	P11362	822 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	AKAP5	P24588	427 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	ABCD1	P33897	745 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	AFF1	P51825	1210 aa	Known RBP	13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	PMS1	P54277	932 aa	Known RBP	13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	OSTN	P61366	133 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	MPZL3	Q6UWV2	235 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	AGMO	Q6ZNB7	445 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	MRPL10	Q7Z7H8	261 aa	Known RBP	13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	SYCP3	Q8IZU3	236 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	ADSSL1	Q8N142	457 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	TRIML1	Q8N9V2	468 aa		13.89	□□□□□ -0.19
HDAC7-223	ENST00000485796	RNPC3	Q96LT9	517 aa	Known RBP	13.89	□□□□□ -0.19

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