RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 TMPRSS7Q7RTY8 843 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 NLRP14Q86W24 1093 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 C1QL4Q86Z23 238 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 CILP2Q8IUL8 1156 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 SLC44A2Q8IWA5 706 aaPredicted RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 FAM26EQ8N5C1 309 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 C7orf31Q8N865 590 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 C2orf69Q8N8R5 385 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 UHMK1Q8TAS1 419 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 DIO2Q92813 273 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 ARHGEF2Q92974 986 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 JAKMIP2Q96AA8 810 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 DIRC2Q96SL1 478 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 MMP19Q99542 508 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 SLC26A6Q9BXS9 759 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 TSPYL1Q9H0U9 437 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 ASCC2Q9H1I8 757 aaPredicted RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 VPS33BQ9H267 617 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 ALG13Q9NP73 1137 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 ATP8A2Q9NTI2 1148 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 ANKEF1Q9NU02 776 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 PIH1D1Q9NWS0 290 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 OXSMQ9NWU1 459 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 IRAK4Q9NWZ3 460 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 SEPT10Q9P0V9 454 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 ZMAT5Q9UDW3 170 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 HERC5Q9UII4 1024 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 BLOC1S6Q9UL45 172 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 COQ6Q9Y2Z9 468 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 KNSTRNQ9Y448 316 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 TRIM17Q9Y577 477 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 SPO11Q9Y5K1 396 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 LRRFIP2Q9Y608 721 aaKnown RBP5.06□□□□□ -1.6
RTN4-213ENST00000485749 NACADO15069 1562 aa5.06□□□□□ -1.6
RTN4-213ENST00000485749 BAZ1AQ9NRL2 1556 aaPredicted RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 SYNJ2BP-COX16A0A087WUM0 186 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 CCDC66A2RUB6 948 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 C2orf81A6NN90 581 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 FAM47E-STBD1D6RA91 191 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 H0Y8X5 98 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 H0YC42 278 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 ARNTLO00327 626 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 PRRG2O14669 202 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 PMM2O15305 246 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 RASA4O43374 803 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGA12O60330 932 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 MSCO60682 206 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 IL33O95760 270 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 SOD2P04179 222 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 MED14OSP0DP75 135 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 FERP16591 822 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 GLDCP23378 1020 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 HOXD10P28358 340 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 SEPHS1P49903 392 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 EVCP57679 992 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 ST5P78524 1137 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 SARNPP82979 210 aaKnown RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 CCDC15Q0P6D6 951 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 MYBPC3Q14896 1274 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 ANKRD1Q15327 319 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 SYCP1Q15431 976 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 AMOTQ4VCS5 1084 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 HECTD3Q5T447 861 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 INTS11Q5TA45 600 aaKnown RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 BROXQ5VW32 411 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 EEF1DP3Q658K8 133 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 GALNT17Q6IS24 598 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 XRRA1Q6P2D8 792 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 CCBE1Q6UXH8 406 aaPredicted RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 LDHAL6AQ6ZMR3 332 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 LCNL1Q6ZST4 164 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 BRINP3Q76B58 766 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 TBC1D1Q86TI0 1168 aaPredicted RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 ZNF610Q8N9Z0 462 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 DAGLBQ8NCG7 672 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 RASSF8Q8NHQ8 419 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 LMBR1Q8WVP7 490 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 RSAD2Q8WXG1 361 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 GCC1Q96CN9 775 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 SPATA17Q96L03 361 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 MAP7D2Q96T17 732 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 MCMBPQ9BTE3 642 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 BOCQ9BWV1 1114 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 IQCGQ9H095 443 aaKnown RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 RRN3Q9NYV6 651 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 MTRRQ9UBK8 725 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 DKK3Q9UBP4 350 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 SAP30BPQ9UHR5 308 aaKnown RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGA9Q9Y5G4 932 aaKnown RBP5.05□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGA8Q9Y5G5 932 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGA7Q9Y5G6 932 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGA6Q9Y5G7 932 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGA3Q9Y5H0 932 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 PCDHGA2Q9Y5H1 932 aa5.05□□□□□ -1.6
RTN4-213ENST00000485749 KAT6BQ8WYB5 2073 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 NPIPB6E9PJ23 425 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 H7C1D1 291 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 CASQ2O14958 399 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms