RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 FBXO2Q9UK22 296 aaPredicted RBP13.79□□□□□ -0.2
PTCD1-205ENST00000485746 RBM19Q9Y4C8 960 aaKnown RBP13.79□□□□□ -0.2
PTCD1-205ENST00000485746 HES2Q9Y543 173 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 LOXHD1Q8IVV2 1947 aa13.79□□□□□ -0.2
PTCD1-205ENST00000485746 NPHP3-ACAD11A0A0J9YXS1 232 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 SPTLC2O15270 562 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 SLC16A4O15374 487 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 NCK2O43639 380 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 FAM13AO94988 1023 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 F13A1P00488 732 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 POMCP01189 267 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 PLS3P13797 630 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 AKAP5P24588 427 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 STRN3Q13033 797 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 TMEM87AQ8NBN3 555 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
PTCD1-205ENST00000485746 LARP4BQ92615 738 aaKnown RBP13.78□□□□□ -0.2
PTCD1-205ENST00000485746 RAD54LQ92698 747 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 TMEM169Q96HH4 297 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 GAD1Q99259 594 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
PTCD1-205ENST00000485746 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 ENTPD7Q9NQZ7 604 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 TLR9Q9NR96 1032 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 PHLPP2Q6ZVD8 1323 aa13.78□□□□□ -0.2
PTCD1-205ENST00000485746 H0YCG3 227 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 TBCAO75347 108 aaKnown RBP13.77□□□□□ -0.21
PTCD1-205ENST00000485746 NR1I2O75469 434 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 ALDH2P05091 517 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 DDIT3P35638 169 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 MLH1P40692 756 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTCD1-205ENST00000485746 NASPP49321 788 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-205ENST00000485746 PLCB3Q01970 1234 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-205ENST00000485746 TFF2Q03403 129 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 TJAP1Q5JTD0 557 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 PLPP4Q5VZY2 271 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 PDE12Q6L8Q7 609 aaKnown RBP13.77□□□□□ -0.21
PTCD1-205ENST00000485746 TMC7Q7Z402 723 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 MYCT1Q8N699 235 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 ASB2Q96Q27 587 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 TCHPQ9BT92 498 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 MRPL4Q9BYD3 311 aaKnown RBP13.77□□□□□ -0.21
PTCD1-205ENST00000485746 CCDC113Q9H0I3 377 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 TLE6Q9H808 572 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 CLDND1Q9NY35 253 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 KLK14Q9P0G3 267 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 LARSQ9P2J5 1176 aaKnown RBP13.77□□□□□ -0.21
PTCD1-205ENST00000485746 FAN1Q9Y2M0 1017 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 CHD9Q3L8U1 2897 aa13.77□□□□□ -0.21
PTCD1-205ENST00000485746 ARL5CA6NH57 179 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 DNAJB1P25685 340 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 IRS1P35568 1242 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 OR1G1P47890 313 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 SCNN1GP51170 649 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 MAPK7Q13164 816 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 NT5DC1Q5TFE4 455 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 CCDC73Q6ZRK6 1079 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 SV2BQ7L1I2 683 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 RBM23Q86U06 439 aaKnown RBP13.76□□□□□ -0.21
PTCD1-205ENST00000485746 DAW1Q8N136 415 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 SLC39A11Q8N1S5 342 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 LINC00301Q8NCQ3 95 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 BICD1Q96G01 975 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
PTCD1-205ENST00000485746 BLOC1S4Q9NUP1 217 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 SNTG2Q9NY99 539 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 CFAP45Q9UL16 551 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 ODF2LQ9ULJ1 636 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 GDAQ9Y2T3 454 aa13.76□□□□□ -0.21
PTCD1-205ENST00000485746 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 DLL1O00548 723 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 PPP6R2O75170 966 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 YEATS4O95619 227 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 GALTP07902 379 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 KCNA5P22460 613 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 STAT6P42226 847 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 NRIP1P48552 1158 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 SLC11A1P49279 550 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 HYAL1Q12794 435 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 ARSHQ5FYA8 562 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 ZBTB33Q86T24 672 aa13.75□□□□□ -0.21
PTCD1-205ENST00000485746 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms