RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 FAM189BP81408 668 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 L1TD1Q5T7N2 865 aaKnown RBP21.86■■□□□ 1.09
COL6A2-208ENST00000485591 SLC27A1Q6PCB7 646 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 EPM2AIP1Q7L775 607 aaPredicted RBP21.86■■□□□ 1.09
COL6A2-208ENST00000485591 GLIS3Q8NEA6 775 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 PHOSPHO2Q8TCD6 241 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 SMARCE1Q969G3 411 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 TARS2Q9BW92 718 aaKnown RBP21.86■■□□□ 1.09
COL6A2-208ENST00000485591 CLSTN2Q9H4D0 955 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 FAM105AQ9NUU6 356 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 RNF216Q9NWF9 866 aaPredicted RBP21.86■■□□□ 1.09
COL6A2-208ENST00000485591 RMND1Q9NWS8 449 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 COLQQ9Y215 455 aaPredicted RBP21.86■■□□□ 1.09
COL6A2-208ENST00000485591 PCDHA5Q9Y5H7 936 aa21.86■■□□□ 1.09
COL6A2-208ENST00000485591 SKIP12755 728 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 CDR2LQ86X02 465 aaPredicted RBP21.85■■□□□ 1.09
COL6A2-208ENST00000485591 MYOCDQ8IZQ8 938 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 CRIPAKQ8N1N5 446 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 KIAA0895Q8NCT3 520 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 ERCC4Q92889 916 aaPredicted RBP21.85■■□□□ 1.09
COL6A2-208ENST00000485591 TOP1MTQ969P6 601 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 ACCSQ96QU6 501 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 ADPGKQ9BRR6 497 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 ELAC1Q9H777 363 aaKnown RBP21.85■■□□□ 1.09
COL6A2-208ENST00000485591 PTPRHQ9HD43 1115 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 SLC39A2Q9NP94 309 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 EXOC7Q9UPT5 735 aa21.85■■□□□ 1.09
COL6A2-208ENST00000485591 FNDC1Q4ZHG4 1894 aaPredicted RBP21.84■■□□□ 1.09
COL6A2-208ENST00000485591 HNRNPDLO14979 420 aaKnown RBP21.84■■□□□ 1.09
COL6A2-208ENST00000485591 ZNF623O75123 536 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 TOM1L1O75674 476 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 ATP2A2P16615 1042 aaKnown RBP21.84■■□□□ 1.09
COL6A2-208ENST00000485591 PROZP22891 400 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 KCNA1Q09470 495 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 STK4Q13043 487 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 EEF1DP3Q658K8 133 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 ECHDC2Q86YB7 292 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 NPAS4Q8IUM7 802 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 ZNF507Q8TCN5 953 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 BICD1Q96G01 975 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 EIF2AQ9BY44 585 aaKnown RBP21.84■■□□□ 1.09
COL6A2-208ENST00000485591 NUP62CLQ9H1M0 184 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 TMEM161AQ9NX61 479 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 PCDHB2Q9Y5E7 798 aa21.84■■□□□ 1.09
COL6A2-208ENST00000485591 COL4A6Q14031 1691 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 ABLIM1O14639 778 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 PRPF6O94906 941 aaKnown RBP21.83■■□□□ 1.09
COL6A2-208ENST00000485591 NPTXRO95502 500 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 STAG3L1P0CL83 205 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 PTMSP20962 102 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 LIG4P49917 911 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 CAMK4Q16566 473 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 BMT2Q1RMZ1 405 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 DCAF4L1Q3SXM0 396 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 ZNF568Q3ZCX4 644 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 MPZL3Q6UWV2 235 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 APBB1IPQ7Z5R6 666 aaPredicted RBP21.83■■□□□ 1.09
COL6A2-208ENST00000485591 HERC6Q8IVU3 1022 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 SCFD1Q8WVM8 642 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 TRIM6Q9C030 488 aaPredicted RBP21.83■■□□□ 1.09
COL6A2-208ENST00000485591 TMEM206Q9H813 350 aa21.83■■□□□ 1.09
COL6A2-208ENST00000485591 ZMYM2Q9UBW7 1377 aa21.83■■□□□ 1.08
COL6A2-208ENST00000485591 EOMESO95936 686 aa21.82■■□□□ 1.08
COL6A2-208ENST00000485591 ATF7P17544 494 aaPredicted RBP21.82■■□□□ 1.08
COL6A2-208ENST00000485591 SLC39A4Q6P5W5 647 aa21.82■■□□□ 1.08
COL6A2-208ENST00000485591 MRPL10Q7Z7H8 261 aaKnown RBP21.82■■□□□ 1.08
COL6A2-208ENST00000485591 ZNF598Q86UK7 904 aaKnown RBP21.82■■□□□ 1.08
COL6A2-208ENST00000485591 GTPBP4Q9BZE4 634 aaKnown RBP21.82■■□□□ 1.08
COL6A2-208ENST00000485591 CDT1Q9H211 546 aa21.82■■□□□ 1.08
COL6A2-208ENST00000485591 LRFN2Q9ULH4 789 aa21.82■■□□□ 1.08
COL6A2-208ENST00000485591 IPPQ9Y573 584 aa21.82■■□□□ 1.08
COL6A2-208ENST00000485591 PCDHB7Q9Y5E2 793 aa21.82■■□□□ 1.08
COL6A2-208ENST00000485591 GJB5O95377 273 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 MCF2P10911 925 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 HOXD13P35453 343 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 TMCO2Q7Z6W1 182 aaPredicted RBP21.81■■□□□ 1.08
COL6A2-208ENST00000485591 SYCP3Q8IZU3 236 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 SMG8Q8ND04 991 aaKnown RBP21.81■■□□□ 1.08
COL6A2-208ENST00000485591 PGBD4Q96DM1 585 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 KIAA1468Q9P260 1216 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 ANKFY1Q9P2R3 1169 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 MAN1B1Q9UKM7 699 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 GDAQ9Y2T3 454 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 RALGAPA2Q2PPJ7 1873 aa21.81■■□□□ 1.08
COL6A2-208ENST00000485591 CLDN3O15551 220 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 UPP2O95045 317 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 MCL1Q07820 350 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 NOLC1Q14978 699 aaKnown RBP eCLIP21.8■■□□□ 1.08
COL6A2-208ENST00000485591 ZNF658Q5TYW1 1059 aaPredicted RBP21.8■■□□□ 1.08
COL6A2-208ENST00000485591 FAM109BQ6ICB4 259 aaPredicted RBP21.8■■□□□ 1.08
COL6A2-208ENST00000485591 HACE1Q8IYU2 909 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 ZBTB45Q96K62 511 aaPredicted RBP21.8■■□□□ 1.08
COL6A2-208ENST00000485591 TCHPQ9BT92 498 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 IKZF4Q9H2S9 585 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 NXF3Q9H4D5 531 aaKnown RBP21.8■■□□□ 1.08
COL6A2-208ENST00000485591 STYXL1Q9Y6J8 313 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 CITO14578 2027 aa21.8■■□□□ 1.08
COL6A2-208ENST00000485591 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.79■■□□□ 1.08
COL6A2-208ENST00000485591 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.79■■□□□ 1.08
COL6A2-208ENST00000485591 ANKRD63C9JTQ0 380 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms