RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ECHDC2Q86YB7 292 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 CCDC65Q8IXS2 484 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 YME1L1Q96TA2 773 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 HAPLN2Q9GZV7 340 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 NKX2-4Q9H2Z4 354 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 LRFN2Q9ULH4 789 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 INPP5FQ9Y2H2 1132 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 CSPG5O95196 566 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 SARSP49591 514 aaKnown RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 EFNA5P52803 228 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 STRN3Q13033 797 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 POSTNQ15063 836 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 CLLU1OSQ5K130 101 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 ATF7IP2Q5U623 682 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 CLEC17AQ6ZS10 378 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 ZNF720Q7Z2F6 126 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 NELFCDQ8IXH7 590 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 TMEM192Q8IY95 271 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 SMYD4Q8IYR2 804 aaPredicted RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 CRIPAKQ8N1N5 446 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 HELQQ8TDG4 1101 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
APTX-227ENST00000485479 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 TBX20Q9UMR3 447 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 MAPK8IP1Q9UQF2 711 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 IPPQ9Y573 584 aa13.05□□□□□ -0.32
APTX-227ENST00000485479 A0A0U1RQF3 1178 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 A0A1B0GUA9 196 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
APTX-227ENST00000485479 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
APTX-227ENST00000485479 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
APTX-227ENST00000485479 DPYDQ12882 1025 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 STK4Q13043 487 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 SLC39A4Q6P5W5 647 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 Q7L0L9 218 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 ZSWIM2Q8NEG5 633 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 ACO2Q99798 780 aaKnown RBP13.04□□□□□ -0.32
APTX-227ENST00000485479 GDAQ9Y2T3 454 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 PCDHB7Q9Y5E2 793 aa13.04□□□□□ -0.32
APTX-227ENST00000485479 FNDC1Q4ZHG4 1894 aaPredicted RBP13.04□□□□□ -0.32
APTX-227ENST00000485479 TBKBP1A7MCY6 615 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 ANKRD63C9JTQ0 380 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 KINO60870 393 aaKnown RBP13.03□□□□□ -0.32
APTX-227ENST00000485479 EFCAB14O75071 495 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 RPN1P04843 607 aaKnown RBP13.03□□□□□ -0.32
APTX-227ENST00000485479 PBX3P40426 434 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 MATR3P43243 847 aaKnown RBP eCLIP13.03□□□□□ -0.32
APTX-227ENST00000485479 LRIT3Q3SXY7 679 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 FAM26FQ5R3K3 315 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 SLC27A1Q6PCB7 646 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 TMEM130Q8N3G9 435 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 GPT2Q8TD30 523 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
APTX-227ENST00000485479 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 CHST12Q9NRB3 414 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 ABLIM1O14639 778 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 PPP1R37O75864 691 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 DGKIO75912 1065 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 GAP43P17677 238 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 MLH1P40692 756 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 LIG4P49917 911 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 GTF2BQ00403 316 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 EHHADHQ08426 723 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 NCBP1Q09161 790 aaKnown RBP13.03□□□□□ -0.32
APTX-227ENST00000485479 AGMOQ6ZNB7 445 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 ZNF598Q86UK7 904 aaKnown RBP13.03□□□□□ -0.32
APTX-227ENST00000485479 NPAS4Q8IUM7 802 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 THNSL1Q8IYQ7 743 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 NOC3LQ8WTT2 800 aaKnown RBP13.03□□□□□ -0.32
APTX-227ENST00000485479 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 CDT1Q9H211 546 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 OLFML3Q9NRN5 406 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 C1orf112Q9NSG2 853 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 CACNG4Q9UBN1 327 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 USP25Q9UHP3 1055 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 MYO9BQ13459 2157 aa13.03□□□□□ -0.32
APTX-227ENST00000485479 SPTBN5Q9NRC6 3674 aaKnown RBP13.02□□□□□ -0.32
APTX-227ENST00000485479 A0A1W2PPC1 479 aa13.02□□□□□ -0.32
APTX-227ENST00000485479 BIN1O00499 593 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms