RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 A0A087WZ62 844 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 WNT7AO00755 349 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 ZSCAN12O43309 604 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 TADA3O75528 432 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 FGFR1P11362 822 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 TXKP42681 527 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 FAM189BP81408 668 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 SPIRE1Q08AE8 756 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 TCEAL5Q5H9L2 206 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 ARMCX5Q6P1M9 558 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 KSR1Q8IVT5 923 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 TPH2Q8IWU9 490 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 SLC7A3Q8WY07 619 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 NECAB3Q96P71 396 aaPredicted RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 FDXACB1Q9BRP7 624 aaPredicted RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 NSUN3Q9H649 340 aaKnown RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 ZSWIM4Q9H7M6 989 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 UBE2ZQ9H832 354 aaPredicted RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 TMEM161AQ9NX61 479 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 KIAA1468Q9P260 1216 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 KCNA5P22460 613 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 YWHABP31946 246 aaKnown RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 POLGP54098 1239 aaPredicted RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 XKR9Q5GH70 373 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 OTUD6AQ7L8S5 288 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 C4orf19Q8IY42 314 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 GPR161Q8N6U8 529 aaKnown RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 RNF169Q8NCN4 708 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 KCNG4Q8TDN1 519 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 NLRP4Q96MN2 994 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 LMAN2LQ9H0V9 348 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
DDX56-212ENST00000485367 SPTBN5Q9NRC6 3674 aaKnown RBP11.82□□□□□ -0.52
DDX56-212ENST00000485367 ATG2AQ2TAZ0 1938 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.81□□□□□ -0.52
DDX56-212ENST00000485367 TNFRSF10AO00220 468 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 ZBTB39O15060 712 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 SMC2O95347 1197 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 YEATS4O95619 227 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 MCM7P33993 719 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 RFC5P40937 340 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 ME1P48163 572 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 NLRP12P59046 1061 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 TMC6Q7Z403 805 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 ZNF410Q86VK4 478 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 KLHL23Q8NBE8 558 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 P2RX5Q93086 422 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 TMEM143Q96AN5 459 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 USP28Q96RU2 1077 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 EIF2AK1Q9BQI3 630 aaKnown RBP11.81□□□□□ -0.52
DDX56-212ENST00000485367 XPO4Q9C0E2 1151 aaKnown RBP11.81□□□□□ -0.52
DDX56-212ENST00000485367 ELAC1Q9H777 363 aaKnown RBP11.81□□□□□ -0.52
DDX56-212ENST00000485367 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
DDX56-212ENST00000485367 SLITRK3O94933 977 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 ITGB1P05556 798 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 SRGAP2CP0DJJ0 459 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 TUBB4BP68371 445 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 RAD51AP2Q09MP3 1159 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
DDX56-212ENST00000485367 NAALADL2Q58DX5 795 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 ECHDC2Q86YB7 292 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 SPPL3Q8TCT6 385 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
DDX56-212ENST00000485367 MTMR9Q96QG7 549 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 INO80BQ9C086 356 aaPredicted RBP11.8□□□□□ -0.52
DDX56-212ENST00000485367 TMEM60Q9H2L4 133 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 DHX33Q9H6R0 707 aaKnown RBP11.8□□□□□ -0.52
DDX56-212ENST00000485367 AAASQ9NRG9 546 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 TYW1Q9NV66 732 aaKnown RBP11.8□□□□□ -0.52
DDX56-212ENST00000485367 IFNKQ9P0W0 207 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 HCSTQ9UBK5 93 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 FEZ2Q9UHY8 353 aaPredicted RBP11.8□□□□□ -0.52
DDX56-212ENST00000485367 PPME1Q9Y570 386 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 PCDHB12Q9Y5F1 795 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 COL4A3BPQ9Y5P4 624 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 ARID2Q68CP9 1835 aa11.8□□□□□ -0.52
DDX56-212ENST00000485367 HOXA2O43364 376 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 DNAJB1P25685 340 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 EMC2Q15006 297 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 ZNF174Q15697 407 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 PSPC1Q8WXF1 523 aaKnown RBP11.79□□□□□ -0.52
DDX56-212ENST00000485367 EXOC4Q96A65 974 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 CCDC43Q96MW1 224 aaKnown RBP11.79□□□□□ -0.52
DDX56-212ENST00000485367 HSD17B14Q9BPX1 270 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 TMEM117Q9H0C3 514 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
DDX56-212ENST00000485367 IGFLR1Q9H665 355 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 CHST12Q9NRB3 414 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 RNF19AQ9NV58 838 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 A0A087WWV3 80 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
DDX56-212ENST00000485367 H3BQ06 376 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms