RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ZPBP2Q6X784 338 aa15.9■□□□□ 0.14
LRIF1-202ENST00000485275 CBWD2Q8IUF1 395 aa15.9■□□□□ 0.14
LRIF1-202ENST00000485275 FAM114A1Q8IWE2 563 aa15.9■□□□□ 0.14
LRIF1-202ENST00000485275 SCLT1Q96NL6 688 aa15.9■□□□□ 0.14
LRIF1-202ENST00000485275 MRPL4Q9BYD3 311 aaKnown RBP15.9■□□□□ 0.14
LRIF1-202ENST00000485275 TRPV6Q9H1D0 765 aa15.9■□□□□ 0.14
LRIF1-202ENST00000485275 CGNQ9P2M7 1197 aaKnown RBP15.9■□□□□ 0.14
LRIF1-202ENST00000485275 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 EXOC3O60645 756 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 CTSHP09668 335 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 DARSP14868 501 aaKnown RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 RPL13P26373 211 aaKnown RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 MTIF2P46199 727 aaKnown RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 WNT7BP56706 349 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 MGAT3Q09327 533 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 MYBPC2Q14324 1141 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 SNX17Q15036 470 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 PKN2Q16513 984 aaKnown RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 CCDC40Q4G0X9 1142 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 CRELD2Q6UXH1 353 aaPredicted RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 FAM186BQ8IYM0 893 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 CCDC155Q8N6L0 562 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 XXYLT1Q8NBI6 393 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 RDH13Q8NBN7 331 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 DIS3LQ8TF46 1054 aaKnown RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 POMGNT1Q8WZA1 660 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 CPB2Q96IY4 423 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 FBXL18Q96ME1 805 aa15.89■□□□□ 0.13
LRIF1-202ENST00000485275 MAGEC2Q9UBF1 373 aaPredicted RBP15.89■□□□□ 0.13
LRIF1-202ENST00000485275 A0A0B4J269 797 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 LGALS16A8MUM7 142 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 SGPL1O95470 568 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 FGFR1OPO95684 399 aaKnown RBP15.88■□□□□ 0.13
LRIF1-202ENST00000485275 CHRNA1P02708 482 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 PRKCSHP14314 528 aaPredicted RBP15.88■□□□□ 0.13
LRIF1-202ENST00000485275 ARF4P18085 180 aaPredicted RBP15.88■□□□□ 0.13
LRIF1-202ENST00000485275 GARTP22102 1010 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 PBX1P40424 430 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 CDK7P50613 346 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 MRPS6P82932 125 aaKnown RBP15.88■□□□□ 0.13
LRIF1-202ENST00000485275 PTPN11Q06124 597 aaPredicted RBP15.88■□□□□ 0.13
LRIF1-202ENST00000485275 PRPF4BQ13523 1007 aaKnown RBP15.88■□□□□ 0.13
LRIF1-202ENST00000485275 SEZ6Q53EL9 994 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 TSHZ1Q6ZSZ6 1077 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 PPP1R9BQ96SB3 815 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 MKNK1Q9BUB5 465 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 PRMT7Q9NVM4 692 aaPredicted RBP15.88■□□□□ 0.13
LRIF1-202ENST00000485275 CDY2AQ9Y6F7 541 aa15.88■□□□□ 0.13
LRIF1-202ENST00000485275 ARVCFO00192 962 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 N4BP3O15049 544 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 TOM1L1O75674 476 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 GNA14O95837 355 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 EPB41P11171 864 aaKnown RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 ANK1P16157 1881 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 PSMC2P35998 433 aaKnown RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 DLG4P78352 724 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 SNRNP35Q16560 246 aaKnown RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 MAN2A1Q16706 1144 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 C1orf220Q5T0J3 134 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 ATF7IP2Q5U623 682 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 SRGAP1Q7Z6B7 1085 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 FRMD5Q7Z6J6 570 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 RPAINQ86UA6 219 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 CEP120Q8N960 986 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 SLC35C1Q96A29 364 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 NOC4LQ9BVI4 516 aaKnown RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 SENP6Q9GZR1 1112 aaPredicted RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 PDZD7Q9H5P4 517 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 TRIM49P0CI25 452 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 TRIM49CP0CI26 452 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 HARSP12081 509 aaKnown RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 EIF4BP23588 611 aaKnown RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 CDC25BP30305 580 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 HOXA11P31270 313 aaPredicted RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 MCL1Q07820 350 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 PTK7Q13308 1070 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 VWA3BQ502W6 1294 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 TRAF7Q6Q0C0 670 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 ZBTB33Q86T24 672 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 FAM126BQ8IXS8 530 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 NME8Q8N427 588 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 SPC24Q8NBT2 197 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 FAM84AQ96KN4 292 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 PRIMPOLQ96LW4 560 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 CELF4Q9BZC1 486 aaKnown RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 GCOM2Q9BZD3 368 aaPredicted RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 CDT1Q9H211 546 aa15.87■□□□□ 0.13
LRIF1-202ENST00000485275 ARMCX3Q9UH62 379 aaPredicted RBP15.87■□□□□ 0.13
LRIF1-202ENST00000485275 MEFVO15553 781 aaPredicted RBP15.86■□□□□ 0.13
LRIF1-202ENST00000485275 THPOP40225 353 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 TNFSF9P41273 254 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 GJA8P48165 433 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 ACOT2P49753 483 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 CRYBB1P53674 252 aaPredicted RBP15.86■□□□□ 0.13
LRIF1-202ENST00000485275 CCDC173Q0VFZ6 552 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 FAM228AQ86W67 206 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 VSTM4Q8IW00 320 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 GPD1LQ8N335 351 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 FAM213AQ9BRX8 229 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 MSTO1Q9BUK6 570 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms