RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 SUN2Q9UH99 717 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 TAF1BQ53T94 588 aaPredicted RBP16.08■□□□□ 0.16
RXRA-203ENST00000484822 MIGA2Q7L4E1 593 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 METTL23Q86XA0 190 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 GTSE1Q9NYZ3 720 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 TRIM10Q9UDY6 481 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 MST1RQ04912 1400 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 MED21Q13503 144 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 ERICH1Q86X53 443 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 C1orf54Q8WWF1 131 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 TLR3O15455 904 aaKnown RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 OSTNP61366 133 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 ZNF394Q53GI3 561 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 MDH1BQ5I0G3 518 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 RARS2Q5T160 578 aaKnown RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 NOA1Q8NC60 698 aaKnown RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 ARL8AQ96BM9 186 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 SUCLA2Q9P2R7 463 aaPredicted RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 L3MBTL1Q9Y468 752 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 KCNJ6P48051 423 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 GPS1Q13098 491 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 PASD1Q8IV76 773 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 CCNYL1Q8N7R7 359 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 SH3GLB2Q9NR46 395 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 SMARCAL1Q9NZC9 954 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 STRIP2Q9ULQ0 834 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 SERPINB4P48594 390 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 SMAD1Q15797 465 aaKnown RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 TBC1D10CQ8IV04 446 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 RBM41Q96IZ5 413 aaKnown RBP16.07■□□□□ 0.16
RXRA-203ENST00000484822 ZNF229Q9UJW7 825 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 UTYO14607 1347 aa16.07■□□□□ 0.16
RXRA-203ENST00000484822 SEC24DO94855 1032 aaPredicted RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 ZNF18P17022 549 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 GCLMP48507 274 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 PRR5LQ6MZQ0 368 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 RSRC2Q7L4I2 434 aaKnown RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 ZNF564Q8TBZ8 553 aaPredicted RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 DLGAP2Q9P1A6 1054 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 CHEK2O96017 543 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 ARHGDIAP52565 204 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 METTL16Q86W50 562 aaKnown RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 XPO6Q96QU8 1125 aaKnown RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 FAM96AQ9H5X1 160 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 MED7O43513 233 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 NR3C1P04150 777 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 MRPS15P82914 257 aaKnown RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 KLC3Q6P597 504 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 GLYCTKQ8IVS8 523 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 DNAJC9Q8WXX5 260 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 DTNBP1Q96EV8 351 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 C11orf70Q9BRQ4 267 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 FBXO40Q9UH90 709 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 PNPLA7Q6ZV29 1317 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 PP2D1A8MPX8 630 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 GH2P01242 217 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 ENO1P06733 434 aaKnown RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 CCND1P24385 295 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 COPS2P61201 443 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 HIC1Q14526 733 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 TRPM8Q7Z2W7 1104 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 ZBTB33Q86T24 672 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 SFR1Q86XK3 245 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 PROM2Q8N271 834 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 PIGOQ8TEQ8 1089 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 ERP27Q96DN0 273 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 NUP85Q9BW27 656 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 MTIF3Q9H2K0 278 aaKnown RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 TDRD3Q9H7E2 651 aaKnown RBP16.06■□□□□ 0.16
RXRA-203ENST00000484822 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
RXRA-203ENST00000484822 KIF28PB7ZC32 967 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 SERPINB3P29508 390 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 COPB2P35606 906 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 TEDDM1Q5T9Z0 273 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 MIS18BP1Q6P0N0 1132 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
RXRA-203ENST00000484822 HEY1Q9Y5J3 304 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 ATP8B3O60423 1300 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 GOLGA8RI6L899 631 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
RXRA-203ENST00000484822 GNAT1P11488 350 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 CCND2P30279 289 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 PLA2G4AP47712 749 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 ITPK1Q13572 414 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 CNGA3Q16281 694 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 KIAA1841Q6NSI8 718 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 RAD9BQ6WBX8 426 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 AGR3Q8TD06 166 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 RNPC3Q96LT9 517 aaKnown RBP16.05■□□□□ 0.16
RXRA-203ENST00000484822 A0A1W2PQC6 194 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 CCDC22O60826 627 aa16.05■□□□□ 0.16
RXRA-203ENST00000484822 FXR1P51114 621 aaKnown RBP eCLIP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms