RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 HOXA11P31270 313 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MAPK7Q13164 816 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ZNF598Q86UK7 904 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CDR2LQ86X02 465 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FAM178BQ8IXR5 827 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 DAW1Q8N136 415 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SLC17A8Q8NDX2 589 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CLP1Q92989 425 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LPPQ93052 612 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 TCHPQ9BT92 498 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 TMEM134Q9H6X4 195 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 IPPQ9Y573 584 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MTCH2Q9Y6C9 303 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 A0A1B0GUA9 196 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 TRAK2O60296 914 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ZNF623O75123 536 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 RB1P06400 928 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 GAP43P17677 238 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 KCNA4P22459 653 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 BMPR1AP36894 532 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 GPM6BQ13491 265 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 GIT2Q14161 759 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 AMHR2Q16671 573 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 PTPROQ16827 1216 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 DCAF4L1Q3SXM0 396 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ARSHQ5FYA8 562 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 NOMO2Q5JPE7 1267 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 THNSL1Q8IYQ7 743 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 DDX12PQ92771 950 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 PLVAPQ9BX97 442 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 EIF2AQ9BY44 585 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ARHGAP28Q9P2N2 729 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 PARP2Q9UGN5 583 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 TRANK1O15050 2925 aa12.89□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 PRRC2BQ5JSZ5 2229 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 A0A087X0B3 334 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CARNS1A5YM72 827 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 C5orf67F2Z3F1 127 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ZNF568Q3ZCX4 644 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 NAALADL2Q58DX5 795 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CLLU1OSQ5K130 101 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 UBXN11Q5T124 520 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ADALQ6DHV7 355 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 HAUS6Q7Z4H7 955 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CCDC65Q8IXS2 484 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CHAMP1Q96JM3 812 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ZNF558Q96NG5 402 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CASD1Q96PB1 797 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 GBP3Q9H0R5 595 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 NXF3Q9H4D5 531 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 PDZD7Q9H5P4 517 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 MRPL44Q9H9J2 332 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 TYW1Q9NV66 732 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 KANSL3Q9P2N6 904 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ANKFY1Q9P2R3 1169 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
CDK5RAP2-217ENST00000484546 MYH11P35749 1972 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 EYSQ5T1H1 3165 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 MYMKA6NI61 221 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 H3BNC9 293 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ZC3H11AO75152 810 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 NR1I2O75469 434 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CSPG5O95196 566 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 MAPTP10636 758 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 CMA1P23946 247 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 PPM1AP35813 382 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 MLH1P40692 756 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ALDH7A1P49419 539 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 LIG4P49917 911 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 YARSP54577 528 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 NCKAP1LP55160 1127 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 ASIC1P78348 528 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 HERC4Q5GLZ8 1057 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 STXBP4Q6ZWJ1 553 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 SMG8Q8ND04 991 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP2-217ENST00000484546 TMEM161BQ8NDZ6 487 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms