RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 GLB1LQ6UWU2 654 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 AGMOQ6ZNB7 445 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 HACE1Q8IYU2 909 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 ABI1Q8IZP0 508 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 FBXO22Q8NEZ5 403 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 MYLIPQ8WY64 445 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 DDX12PQ92771 950 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 P2RX5Q93086 422 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 DNAJC19Q96DA6 116 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 CHAMP1Q96JM3 812 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 GAS2L1Q99501 681 aaPredicted RBP17.49■□□□□ 0.39
UPF3A-208ENST00000484246 EIF2AQ9BY44 585 aaKnown RBP17.49■□□□□ 0.39
UPF3A-208ENST00000484246 MRPL4Q9BYD3 311 aaKnown RBP17.49■□□□□ 0.39
UPF3A-208ENST00000484246 LMCD1Q9NZU5 365 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 TNFSF13BQ9Y275 285 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 IPPQ9Y573 584 aa17.49■□□□□ 0.39
UPF3A-208ENST00000484246 A0A1W2PQ27 194 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 A0A1W2PQ64 194 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 A0A1W2PQD8 194 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 CARNS1A5YM72 827 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 TTLL13PA6NNM8 815 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 SFI1A8K8P3 1242 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 H3BNC9 293 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 SLC16A4O15374 487 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 KRT18P05783 430 aaKnown RBP17.48■□□□□ 0.39
UPF3A-208ENST00000484246 FOSL2P15408 326 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 PROZP22891 400 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 DCAF4L1Q3SXM0 396 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
UPF3A-208ENST00000484246 ATF7IP2Q5U623 682 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 ZPBP2Q6X784 338 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 PDILTQ8N807 584 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 C11orf84Q9BUA3 381 aaPredicted RBP17.48■□□□□ 0.39
UPF3A-208ENST00000484246 LRRC27Q9C0I9 530 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 CWH43Q9H720 699 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 RSAD1Q9HA92 442 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 PTPRHQ9HD43 1115 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 HPSEQ9Y251 543 aa17.48■□□□□ 0.39
UPF3A-208ENST00000484246 MEIS3P2A8K0S8 358 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 TRAK2O60296 914 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 OFD1O75665 1012 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 PIGRP01833 764 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 GAP43P17677 238 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 LAG3P18627 525 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 CTNNB1P35222 781 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 NOMO2Q5JPE7 1267 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 LRRC55Q6ZSA7 311 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 APBB1IPQ7Z5R6 666 aaPredicted RBP17.47■□□□□ 0.39
UPF3A-208ENST00000484246 RNF169Q8NCN4 708 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 HELQQ8TDG4 1101 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 LPPQ93052 612 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 DHX58Q96C10 678 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 ACO2Q99798 780 aaKnown RBP17.47■□□□□ 0.39
UPF3A-208ENST00000484246 ADPGKQ9BRR6 497 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 TRIM6Q9C030 488 aaPredicted RBP17.47■□□□□ 0.39
UPF3A-208ENST00000484246 NXF3Q9H4D5 531 aaKnown RBP17.47■□□□□ 0.39
UPF3A-208ENST00000484246 CERS4Q9HA82 394 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 AAASQ9NRG9 546 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 OLFML3Q9NRN5 406 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 USP25Q9UHP3 1055 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 KCNH3Q9ULD8 1083 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 GIT1Q9Y2X7 761 aa17.47■□□□□ 0.39
UPF3A-208ENST00000484246 ABLIM1O14639 778 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.39
UPF3A-208ENST00000484246 PPP1R37O75864 691 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 NPTXRO95502 500 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 ITGA4P13612 1032 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
UPF3A-208ENST00000484246 AMPD3Q01432 767 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 EEF1DP3Q658K8 133 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 HAUS6Q7Z4H7 955 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 FAM178BQ8IXR5 827 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 MYCT1Q8N699 235 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 GDPD5Q8WTR4 605 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 HVCN1Q96D96 273 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 PANK2Q9BZ23 570 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 TRIM9Q9C026 710 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 LMAN2LQ9H0V9 348 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 TYW1Q9NV66 732 aaKnown RBP17.46■□□□□ 0.39
UPF3A-208ENST00000484246 CHD7Q9P2D1 2997 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 MTUS1Q9ULD2 1270 aa17.46■□□□□ 0.39
UPF3A-208ENST00000484246 TOM1L1O75674 476 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 PFKFB1P16118 471 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 GTF2BQ00403 316 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 STRN3Q13033 797 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 DYMQ7RTS9 669 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 SFR1Q86XK3 245 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 MAP4K3Q8IVH8 894 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 URGCPQ8TCY9 931 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 C7orf25Q9BPX7 421 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 STRA6Q9BX79 667 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 TBC1D13Q9NVG8 400 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 KANSL3Q9P2N6 904 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 MTCH2Q9Y6C9 303 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 CDH23Q9H251 3354 aa17.45■□□□□ 0.38
UPF3A-208ENST00000484246 RALGAPA2Q2PPJ7 1873 aa17.44■□□□□ 0.38
UPF3A-208ENST00000484246 K7ENM7 598 aa17.44■□□□□ 0.38
UPF3A-208ENST00000484246 ACTN4O43707 911 aaKnown RBP17.44■□□□□ 0.38
UPF3A-208ENST00000484246 GTPBP6O43824 516 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms