RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 TRIM6Q9C030 488 aaPredicted RBP29.34■■■□□ 2.29
SMDT1-203ENST00000484235 CUEDC2Q9H467 287 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 UBN1Q9NPG3 1134 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 FAM13BQ9NYF5 915 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 THEGQ9P2T0 379 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 IPPQ9Y573 584 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 NCOR1O75376 2440 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 TTLL13PA6NNM8 815 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 H0YCG3 227 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 H3BNC9 293 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 N4BP3O15049 544 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 LPXNO60711 386 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 TBCAO75347 108 aaKnown RBP29.33■■■□□ 2.29
SMDT1-203ENST00000484235 CCDC85BQ15834 202 aaPredicted RBP29.33■■■□□ 2.29
SMDT1-203ENST00000484235 AGMOQ6ZNB7 445 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 IQUBQ8NA54 791 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 TMEM161BQ8NDZ6 487 aa29.33■■■□□ 2.29
SMDT1-203ENST00000484235 MEIS3P2A8K0S8 358 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 TNFRSF10AO00220 468 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 OFD1O75665 1012 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 ITGA4P13612 1032 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 SCP2P22307 547 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 ANP32AP39687 249 aaKnown RBP29.32■■■□□ 2.28
SMDT1-203ENST00000484235 E2F4Q16254 413 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 NT5DC1Q5TFE4 455 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 ADALQ6DHV7 355 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 LRRC55Q6ZSA7 311 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 CDR2LQ86X02 465 aaPredicted RBP29.32■■■□□ 2.28
SMDT1-203ENST00000484235 HACE1Q8IYU2 909 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 LRRC43Q8N309 656 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 DDX12PQ92771 950 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 MRPL9Q9BYD2 267 aaKnown RBP29.32■■■□□ 2.28
SMDT1-203ENST00000484235 PDZD7Q9H5P4 517 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 AAASQ9NRG9 546 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 USP20Q9Y2K6 914 aa29.32■■■□□ 2.28
SMDT1-203ENST00000484235 MYMKA6NI61 221 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 GTPBP6O43824 516 aaPredicted RBP29.31■■■□□ 2.28
SMDT1-203ENST00000484235 NPTXRO95502 500 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 EDN1P05305 212 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 MAPTP10636 758 aaKnown RBP29.31■■■□□ 2.28
SMDT1-203ENST00000484235 GPM6BQ13491 265 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 SPOUT1Q5T280 376 aaKnown RBP29.31■■■□□ 2.28
SMDT1-203ENST00000484235 DYMQ7RTS9 669 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 TAS1R3Q7RTX0 852 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 GDPD5Q8WTR4 605 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 KCNN1Q92952 543 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 ADPGKQ9BRR6 497 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 C11orf84Q9BUA3 381 aaPredicted RBP29.31■■■□□ 2.28
SMDT1-203ENST00000484235 MRPL4Q9BYD3 311 aaKnown RBP29.31■■■□□ 2.28
SMDT1-203ENST00000484235 ZHX3Q9H4I2 956 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 CWH43Q9H720 699 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 LMCD1Q9NZU5 365 aa29.31■■■□□ 2.28
SMDT1-203ENST00000484235 CMA1P23946 247 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 NCKAP1LP55160 1127 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 STRN3Q13033 797 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 NOMO2Q5JPE7 1267 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 ATF7IP2Q5U623 682 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 P2RX5Q93086 422 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 LRRC27Q9C0I9 530 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 RNF39Q9H2S5 420 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 RSAD1Q9HA92 442 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 TNFSF13BQ9Y275 285 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 HES2Q9Y543 173 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 PCDHB12Q9Y5F1 795 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 MTCH2Q9Y6C9 303 aa29.3■■■□□ 2.28
SMDT1-203ENST00000484235 POLR2DO15514 142 aaKnown RBP29.29■■■□□ 2.28
SMDT1-203ENST00000484235 TRAK2O60296 914 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 HAUS6Q7Z4H7 955 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 DHX58Q96C10 678 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 DNAJC19Q96DA6 116 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 ACO2Q99798 780 aaKnown RBP29.29■■■□□ 2.28
SMDT1-203ENST00000484235 PYM1Q9BRP8 204 aaKnown RBP29.29■■■□□ 2.28
SMDT1-203ENST00000484235 TNMDQ9H2S6 317 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 KBTBD4Q9NVX7 518 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 KANSL3Q9P2N6 904 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 KCNH3Q9ULD8 1083 aa29.29■■■□□ 2.28
SMDT1-203ENST00000484235 REV3LO60673 3130 aa29.28■■■□□ 2.28
SMDT1-203ENST00000484235 LAG3P18627 525 aa29.28■■■□□ 2.28
SMDT1-203ENST00000484235 MRPS5P82675 430 aaKnown RBP29.28■■■□□ 2.28
SMDT1-203ENST00000484235 CSPP1Q1MSJ5 1256 aa29.28■■■□□ 2.28
SMDT1-203ENST00000484235 APBB1IPQ7Z5R6 666 aaPredicted RBP29.28■■■□□ 2.28
SMDT1-203ENST00000484235 URGCPQ8TCY9 931 aa29.28■■■□□ 2.28
SMDT1-203ENST00000484235 NXF3Q9H4D5 531 aaKnown RBP29.28■■■□□ 2.28
SMDT1-203ENST00000484235 CIZ1Q9ULV3 898 aaPredicted RBP29.28■■■□□ 2.28
SMDT1-203ENST00000484235 INPP5FQ9Y2H2 1132 aa29.28■■■□□ 2.28
SMDT1-203ENST00000484235 GIT1Q9Y2X7 761 aa29.28■■■□□ 2.28
SMDT1-203ENST00000484235 ABCD1P33897 745 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 AMPD3Q01432 767 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 DCAF4L1Q3SXM0 396 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 EEF1DP3Q658K8 133 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 FAM178BQ8IXR5 827 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 TARS2Q9BW92 718 aaKnown RBP29.27■■■□□ 2.28
SMDT1-203ENST00000484235 TBC1D13Q9NVG8 400 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 HCSTQ9UBK5 93 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 PLAGL2Q9UPG8 496 aa29.27■■■□□ 2.28
SMDT1-203ENST00000484235 FNDC1Q4ZHG4 1894 aaPredicted RBP29.27■■■□□ 2.28
SMDT1-203ENST00000484235 GAP43P17677 238 aa29.26■■■□□ 2.27
SMDT1-203ENST00000484235 PTPROQ16827 1216 aa29.26■■■□□ 2.27
SMDT1-203ENST00000484235 KLHL23Q8NBE8 558 aa29.26■■■□□ 2.27
SMDT1-203ENST00000484235 COLGALT1Q8NBJ5 622 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms