RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TRIM49P0CI25 452 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 TRIM49CP0CI26 452 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 CYP2C9P11712 490 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 PROZP22891 400 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 CASP14P31944 242 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 GRK4P32298 578 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 LIG4P49917 911 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 DLG4P78352 724 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 BFSP1Q12934 665 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 KCNA10Q16322 511 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 MAPK6Q16659 721 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 FAM187BQ17R55 369 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 NBPF20Q3BBV1 942 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 DCAF17Q5H9S7 520 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-226ENST00000483656 ZBTB41Q5SVQ8 909 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 LHX8Q68G74 356 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 CRELD2Q6UXH1 353 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-226ENST00000483656 ZPBP2Q6X784 338 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 TMEM139Q8IV31 216 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 CCDC150Q8NCX0 1101 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 CPLX3Q8WVH0 158 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 POMGNT1Q8WZA1 660 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 MFSD14AQ96MC6 490 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 PPP1R16BQ96T49 567 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 MRPL4Q9BYD3 311 aaKnown RBP11.02□□□□□ -0.65
HDAC6-226ENST00000483656 TMX1Q9H3N1 280 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 SPC25Q9HBM1 224 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 PTPRHQ9HD43 1115 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 TRIM17Q9Y577 477 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.02□□□□□ -0.658e-7■■■□□ 18.4
HDAC6-226ENST00000483656 SCN10AQ9Y5Y9 1956 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 TTC26A0AVF1 554 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 AKR1B15C9JRZ8 316 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-226ENST00000483656 RBAK-RBAKDNI3L0D1 243 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 INO80B-WBP1J3KQ70 363 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 EXTL3O43909 919 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 ZEB2O60315 1214 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 FAM189A1O60320 539 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 MFAP3LO75121 409 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 GPR32O75388 356 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 NOL4O94818 638 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 ASGR1P07306 291 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 PHKA2P46019 1235 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 RGS19P49795 217 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 VAMP7P51809 220 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 WNT7BP56706 349 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 NLRP11P59045 1033 aaKnown RBP11.01□□□□□ -0.65
HDAC6-226ENST00000483656 PPP3CAQ08209 521 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 SNRNP35Q16560 246 aaKnown RBP11.01□□□□□ -0.65
HDAC6-226ENST00000483656 FIGNQ5HY92 759 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 EEF1DP3Q658K8 133 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 SLFN12LQ6IEE8 588 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 TSHZ1Q6ZSZ6 1077 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 INTS8Q75QN2 995 aaKnown RBP11.01□□□□□ -0.65
HDAC6-226ENST00000483656 ZNF410Q86VK4 478 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 ZSCAN30Q86W11 494 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 PPFIBP1Q86W92 1011 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 GPD1LQ8N335 351 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 C7orf31Q8N865 590 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 DNAJB3Q8WWF6 145 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 MAP7D2Q96T17 732 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 FAM213AQ9BRX8 229 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-226ENST00000483656 FAM49AQ9H0Q0 323 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-226ENST00000483656 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 AGO2Q9UKV8 859 aaKnown RBP11.01□□□□□ -0.65
HDAC6-226ENST00000483656 CAPN11Q9UMQ6 739 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 KAT6AQ92794 2004 aa11.01□□□□□ -0.65
HDAC6-226ENST00000483656 TRIP12Q14669 1992 aaPredicted RBP11□□□□□ -0.65
HDAC6-226ENST00000483656 KIAA0391O15091 583 aaKnown RBP11□□□□□ -0.65
HDAC6-226ENST00000483656 TOM1L1O75674 476 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 KRT13P13646 458 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 SLC9A1P19634 815 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 FECHP22830 423 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 SFPQP23246 707 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC6-226ENST00000483656 FMO5P49326 533 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 APBA1Q02410 837 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 MCL1Q07820 350 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 CYP24A1Q07973 514 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 PRPF4BQ13523 1007 aaKnown RBP11□□□□□ -0.65
HDAC6-226ENST00000483656 TRIM14Q14142 442 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 KIZQ2M2Z5 673 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 CBWD6Q4V339 395 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 CBWD3Q5JTY5 395 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 CBWD5Q5RIA9 395 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 TCERG1LQ5VWI1 586 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 GDF6Q6KF10 455 aaPredicted RBP11□□□□□ -0.65
HDAC6-226ENST00000483656 SRGAP1Q7Z6B7 1085 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 SESTD1Q86VW0 696 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 TMC2Q8TDI7 906 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 PARD3BQ8TEW8 1205 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 SH3TC2Q8TF17 1288 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 WNT8BQ93098 351 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 PANX2Q96RD6 677 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 MSTO1Q9BUK6 570 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 NUP58Q9BVL2 599 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 LSM14BQ9BX40 385 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms