RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CUTAO60888 179 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 UBE3AQ05086 875 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 DNM1Q05193 864 aaKnown RBP19.83■□□□□ 0.77
HDAC6-225ENST00000483506 RAD51AP2Q09MP3 1159 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 CAMK1Q14012 370 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 TIGD5Q53EQ6 642 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 AXDND1Q5T1B0 1012 aaPredicted RBP19.83■□□□□ 0.77
HDAC6-225ENST00000483506 SPOUT1Q5T280 376 aaKnown RBP19.83■□□□□ 0.77
HDAC6-225ENST00000483506 RRAGBQ5VZM2 374 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 CCDC73Q6ZRK6 1079 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 SPPL3Q8TCT6 385 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 TRIM6Q9C030 488 aaPredicted RBP19.83■□□□□ 0.77
HDAC6-225ENST00000483506 TBC1D13Q9NVG8 400 aa19.83■□□□□ 0.77
HDAC6-225ENST00000483506 LARSQ9P2J5 1176 aaKnown RBP19.83■□□□□ 0.77
HDAC6-225ENST00000483506 MYO7AQ13402 2215 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 A0A087X0B3 334 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 NPTXRO95502 500 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 ITGA4P13612 1032 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 SCP2P22307 547 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 PPM1AP35813 382 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 SMTNP53814 917 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 NCKAP1LP55160 1127 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 PLCB3Q01970 1234 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 GIT2Q14161 759 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 CCDC85BQ15834 202 aaPredicted RBP19.82■□□□□ 0.76
HDAC6-225ENST00000483506 LONRF3Q496Y0 759 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 NT5DC1Q5TFE4 455 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 KCNT2Q6UVM3 1135 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 CDR2LQ86X02 465 aaPredicted RBP19.82■□□□□ 0.76
HDAC6-225ENST00000483506 HACE1Q8IYU2 909 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 TMEM161BQ8NDZ6 487 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 ZNF558Q96NG5 402 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 RNF39Q9H2S5 420 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 NXF3Q9H4D5 531 aaKnown RBP19.82■□□□□ 0.76
HDAC6-225ENST00000483506 ALG13Q9NP73 1137 aaKnown RBP19.82■□□□□ 0.76
HDAC6-225ENST00000483506 KANSL3Q9P2N6 904 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 RCOR1Q9UKL0 485 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 LZTS1Q9Y250 596 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 GIT1Q9Y2X7 761 aa19.82■□□□□ 0.76
HDAC6-225ENST00000483506 SLC16A4O15374 487 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 FGF18O76093 207 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 MAPTP10636 758 aaKnown RBP19.81■□□□□ 0.76
HDAC6-225ENST00000483506 DCAF4L1Q3SXM0 396 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 FOXD4L6Q3SYB3 417 aaPredicted RBP19.81■□□□□ 0.76
HDAC6-225ENST00000483506 FOXD4L3Q6VB84 417 aaPredicted RBP19.81■□□□□ 0.76
HDAC6-225ENST00000483506 MICALL1Q8N3F8 863 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 URGCPQ8TCY9 931 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 PARVGQ9HBI0 331 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 PTPRHQ9HD43 1115 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 TNFSF13BQ9Y275 285 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 HES2Q9Y543 173 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 BRWD1Q9NSI6 2320 aa19.81■□□□□ 0.76
HDAC6-225ENST00000483506 ARL5CA6NH57 179 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 H0YCG3 227 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 DNAJB1P25685 340 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-225ENST00000483506 DHX8Q14562 1220 aaKnown RBP19.8■□□□□ 0.76
HDAC6-225ENST00000483506 E2F4Q16254 413 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 ATF7IP2Q5U623 682 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 EEF1DP3Q658K8 133 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 SHC4Q6S5L8 630 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 SLC39A11Q8N1S5 342 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 PPM1EQ8WY54 764 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 FIZ1Q96SL8 496 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 ACO2Q99798 780 aaKnown RBP19.8■□□□□ 0.76
HDAC6-225ENST00000483506 ADPGKQ9BRR6 497 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 MRPL4Q9BYD3 311 aaKnown RBP19.8■□□□□ 0.76
HDAC6-225ENST00000483506 NSUN3Q9H649 340 aaKnown RBP19.8■□□□□ 0.76
HDAC6-225ENST00000483506 NRDE2Q9H7Z3 1164 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 INPP5FQ9Y2H2 1132 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 USP20Q9Y2K6 914 aa19.8■□□□□ 0.76
HDAC6-225ENST00000483506 XIRP2A4UGR9 3374 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 LIG1P18858 919 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 PROZP22891 400 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 STAT6P42226 847 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 AFF1P51825 1210 aaKnown RBP19.79■□□□□ 0.76
HDAC6-225ENST00000483506 BCAR1P56945 870 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 COL19A1Q14993 1142 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 SV2BQ7L1I2 683 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.79■□□□□ 0.76
HDAC6-225ENST00000483506 THNSL1Q8IYQ7 743 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 GSTCDQ8NEC7 633 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 POF1BQ8WVV4 589 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 GAD1Q99259 594 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 SPG21Q9NZD8 308 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 PCDHA7Q9UN72 937 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 ATP6V1DQ9Y5K8 247 aa19.79■□□□□ 0.76
HDAC6-225ENST00000483506 TDRD15B5MCY1 1934 aaKnown RBP19.78■□□□□ 0.76
HDAC6-225ENST00000483506 ABLIM1O14639 778 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 B4GALT3O60512 393 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 TBCAO75347 108 aaKnown RBP19.78■□□□□ 0.76
HDAC6-225ENST00000483506 FAM13AO94988 1023 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 KRT18P05783 430 aaKnown RBP19.78■□□□□ 0.76
HDAC6-225ENST00000483506 MLH1P40692 756 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 ALDH7A1P49419 539 aaKnown RBP19.78■□□□□ 0.76
HDAC6-225ENST00000483506 DSC1Q08554 894 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 TMEM132AQ24JP5 1023 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 APBB1IPQ7Z5R6 666 aaPredicted RBP19.78■□□□□ 0.76
HDAC6-225ENST00000483506 ZNF280BQ86YH2 543 aa19.78■□□□□ 0.76
HDAC6-225ENST00000483506 MRPS27Q92552 414 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms