RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 IGBP1P78318 339 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 MRPS6P82932 125 aaKnown RBP6.7□□□□□ -1.34
CSDE1-207ENST00000483407 MGAT3Q09327 533 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 HYAL1Q12794 435 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 SMAD2Q15796 467 aaKnown RBP6.7□□□□□ -1.34
CSDE1-207ENST00000483407 FBXO47Q5MNV8 452 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 MEI1Q5TIA1 1274 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 RUFY4Q6ZNE9 571 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 HS2ST1Q7LGA3 356 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 MB21D2Q8IYB1 491 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-207ENST00000483407 CMTR2Q8IYT2 770 aaKnown RBP6.7□□□□□ -1.34
CSDE1-207ENST00000483407 DNAJB3Q8WWF6 145 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 ZNF689Q96CS4 500 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-207ENST00000483407 ABHD17AQ96GS6 310 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 SLC30A3Q99726 388 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 MYL10Q9BUA6 226 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 IGFLR1Q9H665 355 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 AZI2Q9H6S1 392 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 LY9Q9HBG7 655 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 JADE2Q9NQC1 790 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 KANSL3Q9P2N6 904 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 SQORQ9Y6N5 450 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 LAMA4Q16363 1823 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 BDP1A6H8Y1 2624 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 KIAA1217Q5T5P2 1943 aa6.7□□□□□ -1.34
CSDE1-207ENST00000483407 GSTTP1A0A1W2PQM5 241 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 RBAK-RBAKDNI3L0D1 243 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 STXBP3O00186 592 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SGSM2O43147 1006 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 MBTPS2O43462 519 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 PRC1O43663 620 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 CSPG5O95196 566 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 PLEKHA8P1O95397 391 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 LINC00271P0C7V0 271 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 INSRRP14616 1297 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 MCM5P33992 734 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 LTBRP36941 435 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 NDUFV1P49821 464 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 ANTXR2P58335 489 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 PAK2Q13177 524 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SMAD4Q13485 552 aaKnown RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 CLUL1Q15846 466 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SYNE3Q6ZMZ3 975 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 FAM43BQ6ZT52 329 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SRBD1Q8N5C6 995 aaKnown RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 C3orf58Q8NDZ4 430 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 MAP4K1Q92918 833 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 P2RX5Q93086 422 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 MFSD14AQ96MC6 490 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SDF4Q9BRK5 362 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 FAM49AQ9H0Q0 323 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 RC3H2Q9HBD1 1191 aaKnown RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 LATS2Q9NRM7 1088 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SLC9A2Q9UBY0 812 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 CD207Q9UJ71 328 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 PCDHA6Q9UN73 950 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 PLAGL2Q9UPG8 496 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 TELO2Q9Y4R8 837 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SUPT16HQ9Y5B9 1047 aaKnown RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 PCDHA8Q9Y5H6 950 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 TRPV2Q9Y5S1 764 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 RBM8AQ9Y5S9 174 aaKnown RBP6.69□□□□□ -1.34
CSDE1-207ENST00000483407 UBIAD1Q9Y5Z9 338 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SLC12A7Q9Y666 1083 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 TAF6LQ9Y6J9 622 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 SIP14410 1827 aa6.69□□□□□ -1.34
CSDE1-207ENST00000483407 PTPRSQ13332 1948 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 FSD2A1L4K1 749 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 SH2B2O14492 632 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 TBX10O75333 385 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 SCG2P13521 617 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 RXRAP19793 462 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 CD33P20138 364 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 CD52P31358 61 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 LIFRP42702 1097 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 SLC26A2P50443 739 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 STAT5BP51692 787 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 RACK1P63244 317 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 PLAURQ03405 335 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 DLX2Q07687 328 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 UBE2SQ16763 222 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 PAN2Q504Q3 1202 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 HERC4Q5GLZ8 1057 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 ODR4Q5SWX8 454 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 MARCH8Q5T0T0 291 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 SPOUT1Q5T280 376 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 DHX32Q7L7V1 743 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 HEATR3Q7Z4Q2 680 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 TEX2Q8IWB9 1127 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 NPAS3Q8IXF0 933 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 NME8Q8N427 588 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 YTHDC1Q96MU7 727 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 MXRA8Q9BRK3 442 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 CELF4Q9BZC1 486 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms