RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 EYA4O95677 639 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 TMEM253P0C7T8 217 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 CTNNA2P26232 953 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 CHKAP35790 457 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 VHLP40337 213 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 HERC4Q5GLZ8 1057 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-205ENST00000483122 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 LRRC8CQ8TDW0 803 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 ATP8A2Q9NTI2 1148 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 CHCHD3Q9NX63 227 aaKnown RBP12.67□□□□□ -0.38
VTI1A-205ENST00000483122 TAS2R14Q9NYV8 317 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 CTTNBP2NLQ9P2B4 639 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 LRCH1Q9Y2L9 728 aa12.67□□□□□ -0.38
VTI1A-205ENST00000483122 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 E9PMD0 336 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 PLSCR1O15162 318 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 KCNA3P22001 575 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 ANXA13P27216 316 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 YARSP54577 528 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 TCERG1LQ5VWI1 586 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 TRMT10CQ7L0Y3 403 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 SCG3Q8WXD2 468 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 CTNNBL1Q8WYA6 563 aaPredicted RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 GRAMD1AQ96CP6 724 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 LRRC37BQ96QE4 947 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 UIMC1Q96RL1 719 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 THAP2Q9H0W7 228 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 DCLRE1BQ9H816 532 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 METTL5Q9NRN9 209 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 NUP98P52948 1817 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 TMEM110-MUSTN1A8MSY1 372 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 APBA3O96018 575 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 SERPINB4P48594 390 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 CASP5P51878 434 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 DYNC1I2Q13409 638 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 SNX30Q5VWJ9 437 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 SRRM1Q8IYB3 904 aaKnown RBP12.66□□□□□ -0.38
VTI1A-205ENST00000483122 CCDC105Q8IYK2 499 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 ZHX3Q9H4I2 956 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 ALG6Q9Y672 507 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 USH1CQ9Y6N9 552 aa12.66□□□□□ -0.38
VTI1A-205ENST00000483122 MROH7Q68CQ1 1323 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 TTLL1O95922 423 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 GNA11P29992 359 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 ATP5DP30049 168 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 COILP38432 576 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-205ENST00000483122 SIK1P57059 783 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 WDR4P57081 412 aaKnown RBP12.65□□□□□ -0.38
VTI1A-205ENST00000483122 DNAJC3Q13217 504 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 CCDC6Q16204 474 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 ARHGEF18Q6ZSZ5 1173 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 CCDC65Q8IXS2 484 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 CRNKL1Q9BZJ0 848 aaKnown RBP12.65□□□□□ -0.38
VTI1A-205ENST00000483122 SLCO1B3Q9NPD5 702 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 NKIRAS1Q9NYS0 192 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 GCNT4Q9P109 453 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 STOML1Q9UBI4 398 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-205ENST00000483122 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
VTI1A-205ENST00000483122 MAPK13O15264 365 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 TP73O15350 636 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 GSTA2P09210 222 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 GSTT1P30711 240 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 STRN3Q13033 797 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 MOGSQ13724 837 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 RCN1Q15293 331 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 KYNUQ16719 465 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 HHATQ5VTY9 493 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 PALB2Q86YC2 1186 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
VTI1A-205ENST00000483122 SH3TC2Q8TF17 1288 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 NSUN4Q96CB9 384 aaKnown RBP12.64□□□□□ -0.39
VTI1A-205ENST00000483122 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 MCM9Q9NXL9 1143 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 PHTF1Q9UMS5 762 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 ECE2O60344 883 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 KRT36O76013 467 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 TJP3O95049 919 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 STARD3NLO95772 234 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
VTI1A-205ENST00000483122 HMGB2P26583 209 aaKnown RBP12.64□□□□□ -0.39
VTI1A-205ENST00000483122 MECOMQ03112 1051 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 GIT2Q14161 759 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 DSTYKQ6XUX3 929 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms