RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TMPRSS11EQ9UL52 423 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 HS3ST4Q9Y661 456 aa4.54□□□□□ -1.68
LAPTM4A-202ENST00000483117 LPXNO60711 386 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 PPFIA2O75334 1257 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 RECQL4O94761 1208 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 GYPEP15421 78 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 LSP1P33241 339 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 ADCYAP1R1P41586 468 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 GZMKP49863 264 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 SCNN1BP51168 640 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 IL2P60568 153 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 PHC1P78364 1004 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 SART3Q15020 963 aaKnown RBP4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 UBE3CQ15386 1083 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 TERF2Q15554 542 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 TIGD2Q4W5G0 525 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 PLEKHG4Q58EX7 1191 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 LMBR1LQ6UX01 489 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 GLB1L3Q8NCI6 653 aaPredicted RBP4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 PDCD2LQ9BRP1 358 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 NDC1Q9BTX1 674 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 KCNH6Q9H252 994 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 PRDM12Q9H4Q4 367 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 EVLQ9UI08 416 aaPredicted RBP4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 HDAC5Q9UQL6 1122 aa4.53□□□□□ -1.68
LAPTM4A-202ENST00000483117 CENPVL1A0A0U1RR11 272 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 GRID2IPA4D2P6 1211 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 LEFTY2O00292 366 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 NRP2O60462 931 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 FKBP9O95302 570 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 LSSP48449 732 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 GPR15P49685 360 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 MANFP55145 182 aaKnown RBP4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 WNT3AP56704 352 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 NRG3P56975 720 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 TRIM25Q14258 630 aaKnown RBP4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 CSRP2Q16527 193 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 METTL24Q5JXM2 366 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 FKBP9P1Q75LS8 142 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 DOK3Q7L591 496 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 LYSMD2Q8IV50 215 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 PPM1KQ8N3J5 372 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 LILRA3Q8N6C8 439 aaPredicted RBP4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 TRPM5Q9NZQ8 1165 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 PRSS50Q9UI38 385 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 NUMBLQ9Y6R0 609 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 ZMYM3Q14202 1370 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 PCSK5Q92824 1860 aa4.52□□□□□ -1.69
LAPTM4A-202ENST00000483117 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 KDM1AO60341 852 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 LAG3P18627 525 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 ADRA1BP35368 520 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 OCRLQ01968 901 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 APBA1Q02410 837 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 CCDC178Q5BJE1 867 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 BROXQ5VW32 411 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 ANKS6Q68DC2 871 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 DPY19L2P1Q6NXN4 242 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 CCDC62Q6P9F0 684 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 ABHD15Q6UXT9 468 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 FRMD7Q6ZUT3 714 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 GPRIN1Q7Z2K8 1008 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 SLC41A1Q8IVJ1 513 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 GLB1L2Q8IW92 636 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 AHI1Q8N157 1196 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 OR2W6PQ8NHA6 318 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 SLC46A2Q9BY10 475 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 TEX101Q9BY14 249 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 SPON1Q9HCB6 807 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 EMC7Q9NPA0 242 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 ANKFY1Q9P2R3 1169 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 PACSIN3Q9UKS6 424 aa4.51□□□□□ -1.69
LAPTM4A-202ENST00000483117 PRR5-ARHGAP8B1AHC4 643 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 PRAMEF4O60810 478 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 TMEM127O75204 238 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 CDC45O75419 566 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 NCR1O76036 304 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 NUDT3O95989 172 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 LMNAP02545 664 aaKnown RBP4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 LPLP06858 475 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 LTA4HP09960 611 aaKnown RBP4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 HSP90B1P14625 803 aaKnown RBP4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 RNASE9P60153 205 aaKnown RBP4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 DDB1Q16531 1140 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 DALRD3Q5D0E6 543 aaKnown RBP4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 CT83Q5H943 113 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 HECTD2Q5U5R9 776 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 GDF7Q7Z4P5 450 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 SYT12Q8IV01 421 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 BEND2Q8NDZ0 799 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 MYEOVQ96EZ4 313 aa4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 MRPL42Q9Y6G3 142 aaKnown RBP4.5□□□□□ -1.69
LAPTM4A-202ENST00000483117 B3GALT2O43825 422 aa4.49□□□□□ -1.69
LAPTM4A-202ENST00000483117 RAB11FIP3O75154 756 aa4.49□□□□□ -1.69
LAPTM4A-202ENST00000483117 PPFIA4O75335 1185 aa4.49□□□□□ -1.69
LAPTM4A-202ENST00000483117 RHOBTB3O94955 611 aa4.49□□□□□ -1.69
LAPTM4A-202ENST00000483117 CANXP27824 592 aaKnown RBP4.49□□□□□ -1.69
LAPTM4A-202ENST00000483117 NHLH2Q02577 135 aa4.49□□□□□ -1.69
LAPTM4A-202ENST00000483117 PITRM1Q5JRX3 1037 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms