RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 ARHGAP28Q9P2N2 729 aa9.66□□□□□ -0.86
SNX4-205ENST00000482965 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
SNX4-205ENST00000482965 TDRD15B5MCY1 1934 aaKnown RBP9.66□□□□□ -0.86
SNX4-205ENST00000482965 PRRC2BQ5JSZ5 2229 aaKnown RBP9.66□□□□□ -0.86
SNX4-205ENST00000482965 TRIP11Q15643 1979 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 A0A1B0GUA9 196 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 MYMKA6NI61 221 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 TTLL13PA6NNM8 815 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 MEIS3P2A8K0S8 358 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 H0YCG3 227 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 K7ENM7 598 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 POLR2DO15514 142 aaKnown RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 PYGBP11216 843 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 ITGA4P13612 1032 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 BMPR1AP36894 532 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 STRN3Q13033 797 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 TPRNQ4KMQ1 711 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 CLLU1OSQ5K130 101 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 ATF7IP2Q5U623 682 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 APBB1IPQ7Z5R6 666 aaPredicted RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 MRPL10Q7Z7H8 261 aaKnown RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 LRRC43Q8N309 656 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 IQUBQ8NA54 791 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 URGCPQ8TCY9 931 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 DDX12PQ92771 950 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 CLP1Q92989 425 aaKnown RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 CASD1Q96PB1 797 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 PYM1Q9BRP8 204 aaKnown RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 NTPCRQ9BSD7 190 aaKnown RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 APOL6Q9BWW8 343 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 MRPL9Q9BYD2 267 aaKnown RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 MRPL4Q9BYD3 311 aaKnown RBP9.65□□□□□ -0.86
SNX4-205ENST00000482965 CUEDC2Q9H467 287 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 PDZD7Q9H5P4 517 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 RSAD1Q9HA92 442 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 AAASQ9NRG9 546 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 USP20Q9Y2K6 914 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 STXBP5LQ9Y2K9 1186 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 IPPQ9Y573 584 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 MYO7AQ13402 2215 aa9.65□□□□□ -0.86
SNX4-205ENST00000482965 CITO14578 2027 aa9.65□□□□□ -0.87
SNX4-205ENST00000482965 TRAK2O60296 914 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 OFD1O75665 1012 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 SLC34A2O95436 690 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 EDN1P05305 212 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 RB1P06400 928 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 LINC00271P0C7V0 271 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 MAPTP10636 758 aaKnown RBP9.64□□□□□ -0.87
SNX4-205ENST00000482965 IDEP14735 1019 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 LAG3P18627 525 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 CMA1P23946 247 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 ZNF131P52739 623 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 NCKAP1LP55160 1127 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 AMPD3Q01432 767 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 GPM6BQ13491 265 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 ADGRE1Q14246 886 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 E2F4Q16254 413 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 DCAF4L1Q3SXM0 396 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 NOMO2Q5JPE7 1267 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 NT5DC1Q5TFE4 455 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 EEF1DP3Q658K8 133 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 ADALQ6DHV7 355 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 AGMOQ6ZNB7 445 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 TAS1R3Q7RTX0 852 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 HAUS6Q7Z4H7 955 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 FAM178BQ8IXR5 827 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 SMG8Q8ND04 991 aaKnown RBP9.64□□□□□ -0.87
SNX4-205ENST00000482965 TMEM161BQ8NDZ6 487 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 RSPH1Q8WYR4 309 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 STAMQ92783 540 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 PHF12Q96QT6 1004 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 C11orf84Q9BUA3 381 aaPredicted RBP9.64□□□□□ -0.87
SNX4-205ENST00000482965 TARS2Q9BW92 718 aaKnown RBP9.64□□□□□ -0.87
SNX4-205ENST00000482965 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 LRRC27Q9C0I9 530 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 TNMDQ9H2S6 317 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 NXF3Q9H4D5 531 aaKnown RBP9.64□□□□□ -0.87
SNX4-205ENST00000482965 MAGEF1Q9HAY2 307 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 TYW1Q9NV66 732 aaKnown RBP9.64□□□□□ -0.87
SNX4-205ENST00000482965 HCSTQ9UBK5 93 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 HES2Q9Y543 173 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 PCDHB12Q9Y5F1 795 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 PLXNA4Q9HCM2 1894 aa9.64□□□□□ -0.87
SNX4-205ENST00000482965 A0A1B0GVL5 298 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 C5orf67F2Z3F1 127 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 H3BNC9 293 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 PFKFB1P16118 471 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 GAP43P17677 238 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 SCP2P22307 547 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 RNASELQ05823 741 aaKnown RBP9.63□□□□□ -0.87
SNX4-205ENST00000482965 ZNF568Q3ZCX4 644 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 LRRC55Q6ZSA7 311 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 SFR1Q86XK3 245 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 CCDC65Q8IXS2 484 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 CEP57L1Q8IYX8 460 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms