RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MAPK8IP1Q9UQF2 711 aa21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 LAMA2P24043 3122 aaKnown RBP21.85■■□□□ 1.09
TRAPPC12-220ENST00000482645 ABHD14A-ACY1A0A1B0GW23 586 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 BMP6P22004 513 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 SCP2P22307 547 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 AXLP30530 894 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 MATR3P43243 847 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 KCNJ6P48051 423 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 LIG4P49917 911 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 ALCAMQ13740 583 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 RTN4RL1Q86UN2 441 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 MAP4K3Q8IVH8 894 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 HVCN1Q96D96 273 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 ACCSQ96QU6 501 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 ACO2Q99798 780 aaKnown RBP21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 TSPYL2Q9H2G4 693 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 TSPY26PQ9H489 355 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 PDZD7Q9H5P4 517 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 ANO10Q9NW15 660 aa21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 CXXC1Q9P0U4 656 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC12-220ENST00000482645 ENPP3O14638 875 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 BAIAP3O94812 1187 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 HARSP12081 509 aaKnown RBP21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 DSC3Q14574 896 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 SHHQ15465 462 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 ANO6Q4KMQ2 910 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 ZNF658Q5TYW1 1059 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 MYOCDQ8IZQ8 938 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 RNF169Q8NCN4 708 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 SCFD1Q8WVM8 642 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 RNPC3Q96LT9 517 aaKnown RBP21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 TCHPQ9BT92 498 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 STRA6Q9BX79 667 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 TRIM6Q9C030 488 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 DNAJC25Q9H1X3 360 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 RGS18Q9NS28 235 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 EXOC7Q9UPT5 735 aa21.83■■□□□ 1.09
TRAPPC12-220ENST00000482645 A0A1B0GUA9 196 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 N4BP3O15049 544 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 EIF3DO15371 548 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 EFCAB14O75071 495 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 NPTXRO95502 500 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 WDR5P61964 334 aaKnown RBP21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 DEFB103AP81534 67 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 ZNF568Q3ZCX4 644 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 EEF1DP3Q658K8 133 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 SLC27A1Q6PCB7 646 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 C11orf57Q6ZUT1 292 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 EPM2AIP1Q7L775 607 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 ZBTB33Q86T24 672 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 HERVK_113Q902F9 699 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 ADPGKQ9BRR6 497 aa21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 EIF2AQ9BY44 585 aaKnown RBP21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 MTIF3Q9H2K0 278 aaKnown RBP21.82■■□□□ 1.08
TRAPPC12-220ENST00000482645 TISP43B9A030 160 aa21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 UPP2O95045 317 aa21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 SLC24A5Q71RS6 500 aa21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 TMCO2Q7Z6W1 182 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 ZBTB45Q96K62 511 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 TMEM206Q9H813 350 aa21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 C1orf112Q9NSG2 853 aa21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 TNFSF13BQ9Y275 285 aa21.81■■□□□ 1.08
TRAPPC12-220ENST00000482645 AMHP03971 560 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 UBXN11Q5T124 520 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 FAM117BQ6P1L5 589 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 ZPBP2Q6X784 338 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 ZNF507Q8TCN5 953 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 KCNN1Q92952 543 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 CCDC51Q96ER9 411 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 FAM105AQ9NUU6 356 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 SLC4A7Q9Y6M7 1214 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 UBE4BO95155 1302 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 ANKRD63C9JTQ0 380 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 TOM1L1O75674 476 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 HOXD13P35453 343 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 SLC39A4Q6P5W5 647 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 MPZL3Q6UWV2 235 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 APOL6Q9BWW8 343 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 DACH1Q9UI36 760 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 HES2Q9Y543 173 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 PCDHB2Q9Y5E7 798 aa21.8■■□□□ 1.08
TRAPPC12-220ENST00000482645 ZMYM2Q9UBW7 1377 aa21.79■■□□□ 1.08
TRAPPC12-220ENST00000482645 C9IYK1 514 aa21.79■■□□□ 1.08
TRAPPC12-220ENST00000482645 CLDN3O15551 220 aa21.79■■□□□ 1.08
TRAPPC12-220ENST00000482645 MLKLQ8NB16 471 aa21.79■■□□□ 1.08
TRAPPC12-220ENST00000482645 LRFN2Q9ULH4 789 aa21.79■■□□□ 1.08
TRAPPC12-220ENST00000482645 LAMA3Q16787 3333 aa21.79■■□□□ 1.08
TRAPPC12-220ENST00000482645 A0A0U1RQF3 1178 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 KIF20AO95235 890 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 PIGRP01833 764 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 CD44P16070 742 aaKnown RBP21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 NOLC1Q14978 699 aaKnown RBP eCLIP21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 KNOP1Q1ED39 458 aaKnown RBP21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 BMT2Q1RMZ1 405 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 DCAF4L1Q3SXM0 396 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 KLHL10Q6JEL2 608 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 APBB1IPQ7Z5R6 666 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 ECHDC2Q86YB7 292 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms